Related papers: Pattern matching in $(213,231)$-avoiding permutati…
Pattern avoidance for permutations has been extensively studied, and has been generalized to vincular patterns, where certain elements can be required to be adjacent. In addition, cyclic permutations, i.e., permutations written in a circle…
An instance $I$ of the Stable Matching Problem (SMP) is given by a bipartite graph with a preference list of neighbors for every vertex. A swap in $I$ is the exchange of two consecutive vertices in a preference list. A swap can be viewed as…
We study classes of set partitions determined by the avoidance of multiple patterns, applying a natural notion of partition containment that has been introduced by Sagan. We say that two sets S and T of patterns are equivalent if for each…
A fundamental problem in shape matching and geometric similarity is computing the maximum area overlap between two polygons under translation. For general simple polygons, the best-known algorithm runs in $O((nm)^2 \log(nm))$ time [Mount,…
We first design an $\mathcal{O}(n^2)$ solution for finding a maximum induced matching in permutation graphs given their permutation models, based on a dynamic programming algorithm with the aid of the sweep line technique. With the support…
We investigate the problem of deterministic pattern matching in multiple streams. In this model, one symbol arrives at a time and is associated with one of s streaming texts. The task at each time step is to report if there is a new match…
Solving the first nonmonotonic, longer-than-three instance of a classic enumeration problem, we obtain the generating function $H(x)$ of all 1342-avoiding permutations of length $n$ as well as an {\em exact} formula for their number…
In the Longest Common Factor with $k$ Mismatches (LCF$_k$) problem, we are given two strings $X$ and $Y$ of total length $n$, and we are asked to find a pair of maximal-length factors, one of $X$ and the other of $Y$, such that their…
Permutations whose prefixes contain at least as many ascents as descents are called ballot permutations. Lin, Wang, and Zhao have previously enumerated ballot permutations avoiding small patterns and have proposed the problem of enumerating…
We determine the structure of permutations avoiding the patterns 4213 and 2143. Each such permutation consists of the skew sum of a sequence of plane trees, together with an increasing sequence of points above and an increasing sequence of…
Permutation pattern-avoidance is a central concept of both enumerative and extremal combinatorics. In this paper we study the effect of permutation pattern-avoidance on the complexity of optimization problems. In the context of the dynamic…
Given a convex polygon $P$ with $k$ vertices and a polygonal domain $Q$ consisting of polygonal obstacles with total size $n$ in the plane, we study the optimization problem of finding a largest similar copy of $P$ that can be placed in $Q$…
We study pattern matching problems on two major representations of uncertain sequences used in molecular biology: weighted sequences (also known as position weight matrices, PWM) and profiles (i.e., scoring matrices). In the simple version,…
We consider string matching with variable length gaps. Given a string $T$ and a pattern $P$ consisting of strings separated by variable length gaps (arbitrary strings of length in a specified range), the problem is to find all ending…
A consecutive pattern in a permutation $\pi$ is another permutation $\sigma$ determined by the relative order of a subsequence of contiguous entries of $\pi$. Traditional notions such as descents, runs and peaks can be viewed as particular…
The maximum coverage problem is to select $k$ sets from a collection of sets such that the cardinality of the union of the selected sets is maximized. We consider $(1-1/e-\epsilon)$-approximation algorithms for this NP-hard problem in three…
We study the classical scheduling problem on parallel machines %with precedence constraints where the precedence graph has the bounded depth $h$. Our goal is to minimize the maximum completion time. We focus on developing approximation…
We consider the problem of sorting $n$ elements subject to persistent random comparison errors. In this problem, each comparison between two elements can be wrong with some fixed (small) probability $p$, and comparing the same pair of…
We study the counting problem known as #PPM, whose input is a pair of permutations $\pi$ and $\tau$ (called pattern and text, respectively), and the task is to find the number of subsequences of $\tau$ that have the same relative order as…
Given a set of permutations Pi, let S_n(Pi) denote the set of permutations in the symmetric group S_n that avoid every element of Pi in the sense of pattern avoidance. Given a subset S of {1,...,n-1}, let F_S be the fundamental…