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The seeded Watershed algorithm / minimax semi-supervised learning on a graph computes a minimum spanning forest which connects every pixel / unlabeled node to a seed / labeled node. We propose instead to consider all possible spanning…

Data Structures and Algorithms · Computer Science 2019-11-11 Enrique Fita Sanmartin , Sebastian Damrich , Fred A. Hamprecht

We present a new method for assessing and measuring homophily in networks whose nodes have categorical attributes, namely when the nodes of networks come partitioned into classes (colors). We probe this method in two different classes of…

Discrete Mathematics · Computer Science 2022-05-09 Nicola Apollonio , Paolo Giulio Franciosa , Daniele Santoni

In this paper, we propose new nonparametric approach to network inference that may be viewed as a fusion of block sampling procedures for temporally and spatially dependent processes with the classical network methodology. We develop…

In this thesis we present the novel semi-supervised network-based algorithm P-Net, which is able to rank and classify patients with respect to a specific phenotype or clinical outcome under study. The peculiar and innovative characteristic…

Machine Learning · Computer Science 2017-02-07 Jessica Gliozzo

Network interference amounts to the treatment status of one unit affecting the potential outcome of other units in the population. Testing for spillover effects in this setting makes the null hypothesis non-sharp. An interesting approach to…

Methodology · Statistics 2025-09-24 Supriya Tiwari , Pallavi Basu

An exciting recent development is the uptake of deep neural networks in many scientific fields, where the main objective is outcome prediction with the black-box nature. Significance testing is promising to address the black-box issue and…

Machine Learning · Statistics 2022-06-22 Ben Dai , Xiaotong Shen , Wei Pan

Network datasets appear across a wide range of scientific fields, including biology, physics, and the social sciences. To enable data-driven discoveries from these networks, statistical inference techniques like estimation and hypothesis…

Methodology · Statistics 2026-02-19 Arpan Kumar , Minh Tang , Srijan Sengupta

In this work, we propose a novel centrality metric, referred to as star centrality, which incorporates information from the closed neighborhood of a node, rather than solely from the node itself, when calculating its topological importance.…

Quantitative Methods · Quantitative Biology 2018-03-15 Chrysafis Vogiatzis , Mustafa Can Camur

Finding the important nodes in complex networks by topological structure is of great significance to network invulnerability. Several centrality measures have been proposed recently to evaluate the performance of nodes based on their…

Social and Information Networks · Computer Science 2021-02-23 Pengli Lu , Chen Dong , Yuhong Guo

Networks describe a variety of interacting complex systems in social science, biology and information technology. Usually the nodes of real networks are identified not only by their connections but also by some other characteristics.…

Physics and Society · Physics 2015-05-13 Ginestra Bianconi , Paolo Pin , Matteo Marsili

In this paper, we study the large-scale protein interaction network of yeast uti lizing a stochastic method based upon percolation of random graphs. In order to find the global features of connectivities in the network, we introduce numeric…

Statistical Mechanics · Physics 2007-05-23 Chen-Shan Chin , Manoj Pratim Samanta

Studying significant network patterns, known as graphlets (or motifs), has been a popular approach to understand the underlying organizing principles of complex networks. Statistical significance is routinely assessed by comparing to null…

Physics and Society · Physics 2024-11-08 Bingjie Hao , István A. Kovács

Protein-Protein Interaction Networks aim to model the interactome, providing a powerful tool for understanding the complex relationships governing cellular processes. These networks have numerous applications, including functional…

Molecular Networks · Quantitative Biology 2023-10-05 Rodrigo Henrique Ramos , Cynthia de Oliveira Lage Ferreira , Adenilso Simao

A fundamental problem associated with the task of network reconstruction from dynamical or behavioral data consists in determining the most appropriate model complexity in a manner that prevents overfitting, and produces an inferred network…

Machine Learning · Statistics 2025-03-24 Tiago P. Peixoto

Multilayer (or multiple) networks are widely used to represent diverse patterns of relationships among objects in increasingly complex real-world systems. Identifying a common invariant subspace across network layers has become an active…

Methodology · Statistics 2026-01-13 Qianqian Yao

Recently an increasing amount of research is devoted to the question of how the most influential nodes (seeds) can be found effectively in a complex network. There are a number of measures proposed for this purpose, for instance,…

Social and Information Networks · Computer Science 2015-05-19 Amir Sheikhahmadi , Mohammad A. Nematbakhsh , Arman Shokrollahi

Identifying the importance of nodes of complex networks is of interest to the research of Social Networks, Biological Networks etc.. Current researchers have proposed several measures or algorithms, such as betweenness, PageRank and HITS…

Social and Information Networks · Computer Science 2012-11-26 Bojin Zheng , Deyi Li , Guisheng Chen , Wenhua Du , Jianmin Wang

The heterogeneous structure implies that a very few nodes may play the critical role in maintaining structural and functional properties of a large-scale network. Identifying these vital nodes is one of the most important tasks in network…

Physics and Society · Physics 2020-02-14 Yong Yu , Ming Jing , Na Zhao , Tao Zhou

Analyzing relational data consisting of multiple samples or layers involves critical challenges: How many networks are required to capture the variety of structures in the data? And what are the structures of these representative networks?…

Physics and Society · Physics 2023-06-26 Alec Kirkley , Alexis Rojas , Martin Rosvall , Jean-Gabriel Young

We propose a semiparametric model for dyadic link formations in directed networks. The model contains a set of degree parameters that measure different effects of popularity or outgoingness across nodes, a regression parameter vector that…

Methodology · Statistics 2025-02-21 Lianqiang Qu , Lu Chen , Ting Yan , Yuguo Chen