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Graph Neural Networks have emerged as the most popular architecture for graph-level learning, including graph classification and regression tasks, which frequently arise in areas such as biochemistry and drug discovery. Achieving good…

Machine Learning · Computer Science 2025-03-04 Lukas Fesser , Melanie Weber

Graph inference plays an essential role in machine learning, pattern recognition, and classification. Signal processing based approaches in literature generally assume some variational property of the observed data on the graph. We make a…

Information Theory · Computer Science 2020-08-24 B. Subbareddy , Aditya Siripuram , Jingxin Zhang

We present a novel hierarchical graph clustering algorithm inspired by modularity-based clustering techniques. The algorithm is agglomerative and based on a simple distance between clusters induced by the probability of sampling node pairs.…

Social and Information Networks · Computer Science 2018-06-25 Thomas Bonald , Bertrand Charpentier , Alexis Galland , Alexandre Hollocou

The \emph{distance-number} of a graph $G$ is the minimum number of distinct edge-lengths over all straight-line drawings of $G$ in the plane. This definition generalises many well-known concepts in combinatorial geometry. We consider the…

Combinatorics · Mathematics 2008-09-09 Paz Carmi , Vida Dujmović , Pat Morin , David R. Wood

Graphs are a basic tool for the representation of modern data. The richness of the topological information contained in a graph goes far beyond its mere interpretation as a one-dimensional simplicial complex. We show how topological…

Combinatorics · Mathematics 2018-10-11 Mattia G. Bergomi , Massimo Ferri , Lorenzo Zuffi

Graph embedding is a central problem in social network analysis and many other applications, aiming to learn the vector representation for each node. While most existing approaches need to specify the neighborhood and the dependence form to…

Machine Learning · Computer Science 2018-06-06 Shupeng Gui , Xiangliang Zhang , Shuang Qiu , Mingrui Wu , Jieping Ye , Ji Liu

In this paper, we provide an algorithm for traversing geometric graphs which visits all vertices, and reports every vertex and edge exactly once. To achieve this, we combine a given geometric graph $G$ with the integer lattice, seen as a…

Combinatorics · Mathematics 2020-07-14 Sahand Khakabimamaghani , Masood Masjoody , Ladislav Stacho

We demonstrate that a graph-based search algorithm-relying on the construction of an approximate neighborhood graph-can directly work with challenging non-metric and/or non-symmetric distances without resorting to metric-space mapping…

Information Retrieval · Computer Science 2019-10-09 Leonid Boytsov , Eric Nyberg

Graph vertex ordering is widely employed in spatial data analysis, especially in urban analytics, where street graphs serve as spatial discretization for modeling and simulation. It is also crucial for visualization, as many methods require…

Graphics · Computer Science 2025-10-23 Karelia Salinas , Victor Barella , Thales Viera , Luis Gustavo Nonato

Vertex connectivity and edge connectivity are fundamental concepts in graph theory that have been widely studied from both structural and algorithmic perspectives. The focus of this paper is on computing these two parameters for graphs…

Data Structures and Algorithms · Computer Science 2025-10-14 Therese Biedl , Prosenjit Bose , Karthik Murali

Directed mixed graphs permit directed and bidirected edges between any two vertices. They were first considered in the path analysis developed by Sewall Wright and play an essential role in statistical modeling. We introduce a matrix…

Statistics Theory · Mathematics 2024-07-23 Qingyuan Zhao

Using each node's degree as a proxy for its importance, the topological hierarchy of a complex network is introduced and quantified. We propose a simple dynamical process used to construct networks which are either maximally or minimally…

Soft Condensed Matter · Physics 2008-06-24 Ala Trusina , Sergei Maslov , Petter Minnhagen , Kim Sneppen

For approximate nearest neighbor search, graph-based algorithms have shown to offer the best trade-off between accuracy and search time. We propose the Dynamic Exploration Graph (DEG) which significantly outperforms existing algorithms in…

Information Retrieval · Computer Science 2023-07-25 Nico Hezel , Kai Uwe Barthel , Konstantin Schall , Klaus Jung

A successive vertex ordering of a graph is a linear ordering of its vertices in which every vertex except the first has at least one neighbour appearing earlier. Such orderings arise naturally in incremental growth and…

Combinatorics · Mathematics 2026-04-10 Prarthana Agrawal , Abdurrahman Hadi Erturk , Ard Louis

Complex networks have been applied to model numerous interactive nonlinear systems in the real world. Knowledge about network topology is crucial for understanding the function, performance and evolution of complex systems. In the last few…

Physics and Society · Physics 2009-11-13 Jing Zhao , Lin Tao , Hong Yu , Jian-Hua Luo , Zhi-Wei Cao , Yi-Xue Li

Recently popularized graph neural networks achieve the state-of-the-art accuracy on a number of standard benchmark datasets for graph-based semi-supervised learning, improving significantly over existing approaches. These architectures…

Machine Learning · Statistics 2018-03-13 Kiran K. Thekumparampil , Chong Wang , Sewoong Oh , Li-Jia Li

Complex systems, ranging from soft materials to wireless communication, are often organised as random geometric networks in which nodes and edges evenly fill up the volume of some space. Studying such networks is difficult because they…

Probability · Mathematics 2022-07-19 Ivan Kryven , Rik Versendaal

Graph edit distance / similarity is widely used in many tasks, such as graph similarity search, binary function analysis, and graph clustering. However, computing the exact graph edit distance (GED) or maximum common subgraph (MCS) between…

Databases · Computer Science 2020-07-01 Haibo Xiu , Xiao Yan , Xiaoqiang Wang , James Cheng , Lei Cao

Let $G$ be a connected graph. The average distance of a vertex $v$ of $G$ is the arithmetic mean of the distances from $v$ to all other vertices of $G$. The proximity and remoteness of $G$ are defined as the minimum and maximum,…

Combinatorics · Mathematics 2025-08-15 Peter Dankelmann , Sonwabile Mafunda , Sufiyan Mallu

We propose a new model, the Neighbor Mixture Model (NMM), for modeling node labels in a graph. This model aims to capture correlations between the labels of nodes in a local neighborhood. We carefully design the model so it could be an…

Machine Learning · Computer Science 2021-04-20 Linfeng Liu , Michael C. Hughes , Li-Ping Liu
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