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Purpose Segmentation of the liver from abdominal computed tomography (CT) image is an essential step in some computer assisted clinical interventions, such as surgery planning for living donor liver transplant (LDLT), radiotherapy and…

Computer Vision and Pattern Recognition · Computer Science 2016-05-11 Fang Lu , Fa Wu , Peijun Hu , Zhiyi Peng , Dexing Kong

Automatic liver segmentation plays an important role in computer-aided diagnosis and treatment. Manual segmentation of organs is a difficult and tedious task and so prone to human errors. In this paper, we propose an adaptive 3D region…

Computer Vision and Pattern Recognition · Computer Science 2019-02-06 Shima Rafiei , Nader Karimi , Behzad Mirmahboub , S. M. Reza Soroushmehr , Banafsheh Felfelian , Shadrokh Samavi , Kayvan Najarian

Efficiently quantifying renal structures can provide distinct spatial context and facilitate biomarker discovery for kidney morphology. However, the development and evaluation of the transformer model to segment the renal cortex, medulla,…

Image and Video Processing · Electrical Eng. & Systems 2022-03-07 Xin Yu , Yucheng Tang , Yinchi Zhou , Riqiang Gao , Qi Yang , Ho Hin Lee , Thomas Li , Shunxing Bao , Yuankai Huo , Zhoubing Xu , Thomas A. Lasko , Richard G. Abramson , Bennett A. Landman

Pancreas segmentation in computed tomography imaging has been historically difficult for automated methods because of the large shape and size variations between patients. In this work, we describe a custom-build 3D fully convolutional…

Computer Vision and Pattern Recognition · Computer Science 2018-03-15 Holger Roth , Masahiro Oda , Natsuki Shimizu , Hirohisa Oda , Yuichiro Hayashi , Takayuki Kitasaka , Michitaka Fujiwara , Kazunari Misawa , Kensaku Mori

The segmentation of kidney stones is regarded as a critical preliminary step to enable the identification of urinary stone types through machine- or deep-learning-based approaches. In urology, manual segmentation is considered tedious and…

Image and Video Processing · Electrical Eng. & Systems 2025-05-26 Martin Villagrana , Francisco Lopez-Tiro , Clement Larose , Gilberto Ochoa-Ruiz , Christian Daul

Automated and accurate segmentation of cystoid structures in Optical Coherence Tomography (OCT) is of interest in the early detection of retinal diseases. It is, however, a challenging task. We propose a novel method for localizing cysts in…

Computer Vision and Pattern Recognition · Computer Science 2017-08-29 Karthik Gopinath , Jayanthi Sivaswamy

Autosomal polycystic kidney disease (ARPKD) is associated with progressive enlargement of the kidneys fuelled by the formation and expansion of fluid-filled cysts. The disease is congenital and children that do not succumb to it during the…

Tissues and Organs · Quantitative Biology 2017-02-08 Jake A. Nieto , Michael A. Yamin , Itzhak D. Goldberg , Prakash Narayan

Kidney tumor segmentation emerges as a new frontier of computer vision in medical imaging. This is partly due to its challenging manual annotation and great medical impact. Within the scope of the Kidney Tumor Segmentation Challenge 2019,…

Image and Video Processing · Electrical Eng. & Systems 2019-10-18 Minh H. Vu , Guus Grimbergen , Attila Simkó , Tufve Nyholm , Tommy Löfstedt

In this work, we present a novel latent diffusion-based pipeline for 3D kidney anomaly detection on contrast-enhanced abdominal CT. The method combines Denoising Diffusion Probabilistic Models (DDPMs), Denoising Diffusion Implicit Models…

Computer Vision and Pattern Recognition · Computer Science 2026-01-12 Jen Dusseljee , Sarah de Boer , Alessa Hering

Automatic segmentation of an organ and its cystic region is a prerequisite of computer-aided diagnosis. In this paper, we focus on pancreatic cyst segmentation in abdominal CT scan. This task is important and very useful in clinical…

Computer Vision and Pattern Recognition · Computer Science 2017-06-23 Yuyin Zhou , Lingxi Xie , Elliot K. Fishman , Alan L. Yuille

Image segmentation plays an essential role in medicine for both diagnostic and interventional tasks. Segmentation approaches are either manual, semi-automated or fully-automated. Manual segmentation offers full control over the quality of…

Computer Vision and Pattern Recognition · Computer Science 2019-03-21 Tomas Sakinis , Fausto Milletari , Holger Roth , Panagiotis Korfiatis , Petro Kostandy , Kenneth Philbrick , Zeynettin Akkus , Ziyue Xu , Daguang Xu , Bradley J. Erickson

Chronic kidney disease (CKD) is a major global health issue, affecting over 10% of the population and causing significant mortality. While kidney biopsy remains the gold standard for CKD diagnosis and treatment, the lack of comprehensive…

Ultrasound (US) is widely accessible and radiation-free but has a steep learning curve due to its dynamic nature and non-standard imaging planes. Additionally, the constant need to shift focus between the US screen and the patient poses a…

Image and Video Processing · Electrical Eng. & Systems 2025-07-01 Gijs Luijten , Roberto Maria Scardigno , Lisle Faray de Paiva , Peter Hoyer , Jens Kleesiek , Domenico Buongiorno , Vitoantonio Bevilacqua , Jan Egger

Many renal cancers are incidentally found on non-contrast CT (NCCT) images. On contrast-enhanced CT (CECT) images, most kidney tumors, especially renal cancers, have different intensity values compared to normal tissues. However, on NCCT…

Image and Video Processing · Electrical Eng. & Systems 2023-12-11 Taro Hatsutani , Akimichi Ichinose , Keigo Nakamura , Yoshiro Kitamura

Organ segmentation is a prerequisite for a computer-aided diagnosis (CAD) system to detect pathologies and perform quantitative analysis. For anatomically high-variability abdominal organs such as the pancreas, previous segmentation works…

Computer Vision and Pattern Recognition · Computer Science 2014-08-01 Amal Farag , Le Lu , Evrim Turkbey , Jiamin Liu , Ronald M. Summers

There has been a significant increase from 2010 to 2016 in the number of people suffering from spine problems. The automatic image segmentation of the spine obtained from a computed tomography (CT) image is important for diagnosing spine…

Computer Vision and Pattern Recognition · Computer Science 2017-12-06 Malinda Vania , Dawit Mureja , Deukhee Lee

Automatic liver segmentation from CT volumes is a crucial prerequisite yet challenging task for computer-aided hepatic disease diagnosis and treatment. In this paper, we present a novel 3D deeply supervised network (3D DSN) to address this…

Computer Vision and Pattern Recognition · Computer Science 2016-07-05 Qi Dou , Hao Chen , Yueming Jin , Lequan Yu , Jing Qin , Pheng-Ann Heng

In this study, we present pituitary adenoma volumetry using the free and open source medical image computing platform for biomedical research: (3D) Slicer. Volumetric changes in cerebral pathologies like pituitary adenomas are a critical…

Computer Vision and Pattern Recognition · Computer Science 2012-12-13 Jan Egger , Tina Kapur , Christopher Nimsky , Ron Kikinis

Accurate segmentation of prostate and surrounding organs at risk is important for prostate cancer radiotherapy treatment planning. We present a fully automated workflow for male pelvic CT image segmentation using deep learning. The…

The need for CT scan analysis is growing for pre-diagnosis and therapy of abdominal organs. Automatic organ segmentation of abdominal CT scan can help radiologists analyze the scans faster and segment organ images with fewer errors.…

Computer Vision and Pattern Recognition · Computer Science 2018-03-06 Shima Rafiei , Ebrahim Nasr-Esfahani , S. M. Reza Soroushmehr , Nader Karimi , Shadrokh Samavi , Kayvan Najarian