Related papers: Optimal Staged Self-Assembly of General Shapes
We consider staged self-assembly systems, in which square-shaped tiles can be added to bins in several stages. Within these bins, the tiles may connect to each other, depending on the glue types of their edges. Previous work by Demaine et…
We introduce staged self-assembly of Wang tiles, where tiles can be added dynamically in sequence and where intermediate constructions can be stored for later mixing. This model and its various constraints and performance measures are…
The connection between self-assembly and computation suggests that a shape can be considered the output of a self-assembly ``program,'' a set of tiles that fit together to create a shape. It seems plausible that the size of the smallest…
In this work we propose a generalization of Winfree's abstract Tile Assembly Model (aTAM) in which tile types are assigned rigid shapes, or geometries, along each tile face. We examine the number of distinct tile types needed to assemble…
We prove that the number of tile types required to build squares of size n x n, in Winfree's abstract Tile Assembly Model, when restricted to using only non-cooperative tile bindings, is at least 2n-1, which is also the best known upper…
The algorithmic self-assembly of shapes has been considered in several models of self-assembly. For the problem of \emph{shape construction}, we consider an extended version of the Two-Handed Tile Assembly Model (2HAM), which contains…
In this paper we consider the time complexity of computing the sum and product of two $n$-bit numbers within the tile self-assembly model. The (abstract) tile assembly model is a mathematical model of self-assembly in which system…
Working in a three-dimensional variant of Winfree's abstract Tile Assembly Model, we show that, for all $N \in \mathbb{N}$, there is a tile set that uniquely self-assembles into an $N \times N$ square shape at temperature 1 with optimal…
We discuss the self-assembly system of triangular tiles instead of square tiles, in particular right triangular tiles and equilateral triangular tiles. We show that the triangular tile assembly system, either deterministic or…
We study the role that parallelism plays in time complexity of Winfree's abstract Tile Assembly Model (aTAM), a model of molecular algorithmic self-assembly. In the "hierarchical" aTAM, two assemblies, both consisting of multiple tiles, are…
In the abstract Tile Assembly Model, self-assembling systems consisting of tiles of different colors can form structures on which colored patterns are ``painted.'' We explore the complexity, in terms of the numbers of unique tile types…
We study the minimal complexity of tilings of a plane with a given tile set. We note that every tile set admits either no tiling or some tiling with O(n) Kolmogorov complexity of its n-by-n squares. We construct tile sets for which this…
In this paper, we work in a 2D version of the probabilistic variant of Winfree's abstract Tile Assembly Model defined by Chandran, Gopalkrishnan and Reif (SICOMP 2012) in which attaching tiles are sampled uniformly with replacement. First,…
The regular polyhedra have the highest order of 3D symmetries and are exceptionally at- tractive templates for (self)-assembly using minimal types of building blocks, from nano-cages and virus capsids to large scale constructions like glass…
If a (cusped) surface S admits an ideal triangulation T with no shears, we show an efficient algorithm to give S as a quotient of hypebolic plane by a subgroup of PSL(2, Z). The algorithm runs in time O(n log n), where n is the number of…
Unstable modules over the Steenrod algebra with only the top $k$ operations are introduced in the language of ringoids. We prove the category of such modules has homological dimension at most $k$. A pratical method, which generalizes the…
We prove a Pumping Lemma for the noncooperative abstract Tile Assembly Model, a model central to the theory of algorithmic self-assembly since the beginning of the field. This theory suggests, and our result proves, that small differences…
We study the algebraic and geometric properties of stated skein algebras of surfaces with punctured boundary. We prove that the skein algebra of the bigon is isomorphic to the quantum group ${\mathcal O}_{q^2}(\mathrm{SL}(2))$ providing a…
We consider a class of multi-stage robust covering problems, where additional information is revealed about the problem instance in each stage, but the cost of taking actions increases. The dilemma for the decision-maker is whether to wait…
We prove the unique assembly and unique shape verification problems, benchmark measures of self-assembly model power, are $\mathrm{coNP}^{\mathrm{NP}}$-hard and contained in $\mathrm{PSPACE}$ (and in $\mathrm{\Pi}^\mathrm{P}_{2s}$ for…