Related papers: Treetopes and their Graphs
We introduce a new family of higher-rank graphs, whose construction was inspired by the graphical techniques of Lambek \cite{Lambek} and Johnstone \cite{Johnstone} used for monoid and category emedding results. We show that they are planar…
We define a family of convex polytopes called constrainahedra, which index collisions of horizontal and vertical lines. Our construction proceeds by first defining a poset $C(m,n)$ of good rectangular preorders, then proving that $C(m,n)$…
A matroid is a machine capturing linearity of mathematical objects and producing combinatorial structures. Matroid structure arises everywhere since linearity is a ubiquitous concept. One natural way to obtain matroids is by considering…
An orthant polyhedron is a polyhedron with $m$ hyperfaces, that could be realized as a section of the $m$-dimensional non-negative orthant. We classify all 2-dimensional orthant polyhedra and provide some partial results towards the…
A graph associahedron is a simple polytope whose face lattice encodes the nested structure of the connected subgraphs of a given graph. In this paper, we study certain graph properties of the 1-skeleta of graph associahedra, such as their…
Bolytropes are bounded subsets of an affine building that consist of all points that have distance at most $r$ from some polytrope. We prove that the points of a bolytrope describe the set of all invariant lattices of a bolytrope order,…
There is a well-established dictionary between zonotopes, hyperplane arrangements, and their (oriented) matroids. Arguably one of the most famous examples is the class of graphical zonotopes, also called acyclotopes, which encode…
A hole in a graph $G$ is an induced cycle of length at least four, and an even hole is a hole of even length. The diamond is the graph obtained from the complete graph $K_4$ by removing an edge. A pyramid is a graph consisting of a triangle…
Let $H=(V,F)$ be a simple hypergraph without loops. $H$ is called linear if $|f\cap g|\le 1$ for any $f,g\in F$ with $f\not=g$. The $2$-section of $H$, denoted by $[H]_2$, is a graph with $V([H]_2)=V$ and for any $ u,v\in V([H]_2)$, $uv\in…
Trigraph list homomorphism problems (also known as list matrix partition problems) have generated recent interest, partly because there are concrete problems that are not known to be polynomial time solvable or NP-complete. Thus while…
Phylogenetic networks are a generalization of phylogenetic trees that are used to represent non-tree-like evolutionary histories that arise in organisms such as plants and bacteria, or uncertainty in evolutionary histories. An…
Halin graphs constitute an interesting class of planar and polyhedral graphs. A generalized Halin graph is obtained by connecting all leaves of a planar embedding of a tree via a cycle. A Halin graph is a generalized Halin graph having no…
For each infinite word over a given finite alphabet, we define an increasing sequence of rooted finite graphs, that can be thought as approximations of the famous Sierpinski carpet. These sequences naturally converge to an infinite rooted…
Layered treewidth and row treewidth are recently introduced graph parameters that have been key ingredients in the solution of several well-known open problems. It follows from the definitions that the layered treewidth of a graph is at…
Phylogenetic networks are a generalization of phylogenetic trees allowing for the representation of non-treelike evolutionary events such as hybridization. Typically, such networks have been analyzed based on their `level', i.e. based on…
Given an undirected graph, the non-empty subgraph polytope is the convex hull of the characteristic vectors of pairs (F, S) where S is a non-empty subset of nodes and F is a subset of the edges with both endnodes in S. We obtain a strong…
Three-way dissimilarities are a generalization of (two-way) dissimilarities which can be used to indicate the lack of homogeneity or resemblance between any three objects. Such maps have applications in cluster analysis, and have been used…
In this work we develop a theory of hierarchical clustering for graphs. Our modeling assumption is that graphs are sampled from a graphon, which is a powerful and general model for generating graphs and analyzing large networks. Graphons…
We introduce a taxonomy of interaction types and show that graphs are focal hypergraphs: every graph is canonically a focal hypergraph via its closed neighbourhood structure, and every graph dynamical model is a special case of the general…
Higher-dimensional category theory is the study of n-categories, operads, braided monoidal categories, and other such exotic structures. Although it can be treated purely as an algebraic subject, it is inherently topological in nature: the…