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The essential features of the in vitro refolding of myoglobin are expressed in a solvable physical model. Alpha helices are taken as the fundamental collective coordinates of the system, while the refolding is assumed to be mainly driven by…

Condensed Matter · Physics 2007-05-23 David J. E. Callaway

As a nonlocal extension of continuum mechanics, peridynamics has been widely and effectively applied in different fields where discontinuities in the field variables arise from an initially continuous body. An important component of the…

Numerical Analysis · Mathematics 2021-09-22 Xiao Xu , Marta D'Elia , John T. Foster

The collective response of a system is profoundly shaped by the interaction dynamics between its constituent elements. In physics, tailoring these interactions can enable the observation of unusual phenomena that are otherwise inaccessible…

Spatially confined rigid membranes reorganize their morphology in response to the imposed constraints. A crumpled elastic sheet presents a complex pattern of random folds focusing the deformation energy while compressing a membrane resting…

Using an ensemble of atoms in an optical cavity, we engineer a family of nonlocal Heisenberg Hamiltonians with continuously tunable anisotropy of the spin-spin couplings. We thus gain access to a rich phase diagram, including a…

The Hodgkin-Huxley (HH) model is the currently accepted formalism of neuronal excitability. However, the HH model does not capture a number of biophysical behaviors associated with action potentials or propagating nerve impulses. Physical…

Neurons and Cognition · Quantitative Biology 2015-06-17 Jerel Mueller , William J. Tyler

The present article concludes that a ferromagnetic sample could be considered like a paramagnetic system where the role of magnetic moments plays magnetic domains. Based on this conclusion and taking into account presence of an anisotropic…

Materials Science · Physics 2016-07-18 R. Khachaturyan , V. Mekhitarian

State of the art research and treatment of biological tissues require accurate and efficient methods for describing their mechanical properties. Indeed, micromechanics motivated approaches provide a systematic method for elevating relevant…

Soft Condensed Matter · Physics 2012-05-04 Gal deBotton , Tal Oren

The dynamics and the thermodynamics of particles/spins interacting via long-range forces display several unusual features with respect to systems with short-range interactions. The Hamiltonian Mean Field (HMF) model, a Hamiltonian system of…

Statistical Mechanics · Physics 2016-08-31 Alessandro Pluchino , Vito Latora , Andrea Rapisarda

We construct a homogeneous, nonlinear elastic constitutive law, that models aspects of the mechanical behavior of inhomogeneous fibrin networks. Fibers in such networks buckle when in compression. We model this as a loss of stiffness in…

Biological Physics · Physics 2015-12-18 Phoebus Rosakis , Jacob Notbohm , Guruswami Ravichandran

We introduce and analyse a few examples of massless higher spin theories in Minkowski spacetime. They are defined in terms of master fields, i.e. fields defined in the whole phase space. More specifically we introduce the HS YM-like…

High Energy Physics - Theory · Physics 2020-04-01 L. Bonora , M. Cvitan , P. Dominis Prester , S. Giaccari , T. Stemberga

A model system inspired by recent experiments on the dynamics of a folded protein under the influence of a sinusoidal force is investigated and found to replicate many of the response characteristics of such a system. The essence of the…

Soft Condensed Matter · Physics 2015-09-30 Craig Fogle , Joseph Rudnick , David Jasnow

This work focuses on the thermodynamics of pseudo-elastic models which represent the Mullins effect. Two established models are analyzed theoretically, their thermomechanical properties are derived, and certain critical points are…

Materials Science · Physics 2014-08-05 Christoph Naumann , Jörn Ihlemann

Multibody dynamics simulation plays an important role in various fields, including mechanical engineering, robotics, and biomechanics. Setting up computational models however becomes increasingly challenging as systems grow in size and…

Systems and Control · Electrical Eng. & Systems 2024-02-29 Markus Lohmayer , Giuseppe Capobianco , Sigrid Leyendecker

Many living systems use assemblies of soft and slender structures whose deflections allow them to mechanically probe their immediate environment. In this work, we study the collective response of artificial soft hair assemblies to a shear…

Skeletal muscle modeling has a vital role in movement studies and the development of therapeutic approaches. In the current study, a Huxley-based model for skeletal muscle is proposed, which demonstrates the impact of impairments in muscle…

Medical Physics · Physics 2023-09-07 Fatemeh Jalali , Mohammad Ali Nazari , Arash Bahrami , Pascal Perrier , Yohan Payan

In the spirit of multi-scale modeling, we develop a theoretical framework for spin-lattice coupling that connects, on the one hand, to ab initio calculations of spin-lattice coupling parameters and, on the other hand, to the magneto-elastic…

With this contribution, we give a complete and comprehensive framework for modeling the dynamics of complex mechanical structures as port-Hamiltonian systems. This is motivated by research on the potential of lightweight construction using…

Computational Physics · Physics 2020-08-19 Alexander Warsewa , Michael Böhm , Oliver Sawodny , Cristina Tarín

After discussing the relevance of statistical physics in molecular recognition processes, we present a schematic model for ligand-receptor association based on an Ising chain. We discuss the possible behaviors of the affinity when the…

Soft Condensed Matter · Physics 2010-04-09 Fabrice Thalmann

Ferromagnetic elastic slender structures offer the potential for large actuation displacements under modest external magnetic fields, due to the magneto-mechanical coupling. This paper investigates the phase portraits of the Hamiltonian…

Materials Science · Physics 2026-04-16 G. R. Krishna Chand Avatar , Vivekanand Dabade