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During the past decade, with the significant progress of computational power as well as ever-rising data availability, deep learning techniques became increasingly popular due to their excellent performance on computer vision problems. The…

Quantitative Methods · Quantitative Biology 2017-07-20 Afshine Amidi , Shervine Amidi , Dimitrios Vlachakis , Vasileios Megalooikonomou , Nikos Paragios , Evangelia I. Zacharaki

In recent years, deep learning (DL) approaches have demonstrated promising results in decoding hemodynamic responses captured by functional near-infrared spectroscopy (fNIRS), particularly in the context of brain-computer interface (BCI)…

Machine Learning · Computer Science 2025-10-09 Behtom Adeli , John Mclinden , Pankaj Pandey , Ming Shao , Yalda Shahriari

Antibody-drug conjugate (ADC) has revolutionized the field of cancer treatment in the era of precision medicine due to their ability to precisely target cancer cells and release highly effective drug. Nevertheless, the realization of…

Machine Learning · Computer Science 2024-01-18 Liye Chen , Biaoshun Li , Yihao Chen , Mujie Lin , Shipeng Zhang , Chenxin Li , Yu Pang , Ling Wang

Deep convolutional neural networks (DCNNs) have become the state-of-the-art computational models of biological object recognition. Their remarkable success has helped vision science break new ground and recent efforts have started to…

Computer Vision and Pattern Recognition · Computer Science 2023-08-22 Leonard E. van Dyck , Walter R. Gruber

Identification of drug-target interactions (DTIs) plays a key role in drug discovery. The high cost and labor-intensive nature of in vitro and in vivo experiments have highlighted the importance of in silico-based DTI prediction approaches.…

Quantitative Methods · Quantitative Biology 2019-09-11 Ingoo Lee , Jongsoo Keum , Hojung Nam

We introduce DeepNAT, a 3D Deep convolutional neural network for the automatic segmentation of NeuroAnaTomy in T1-weighted magnetic resonance images. DeepNAT is an end-to-end learning-based approach to brain segmentation that jointly learns…

Computer Vision and Pattern Recognition · Computer Science 2017-02-28 Christian Wachinger , Martin Reuter , Tassilo Klein

Whereas deep neural network (DNN) is increasingly applied to choice analysis, it is challenging to reconcile domain-specific behavioral knowledge with generic-purpose DNN, to improve DNN's interpretability and predictive power, and to…

Machine Learning · Computer Science 2021-04-06 Shenhao Wang , Baichuan Mo , Jinhua Zhao

The prediction of the atomistic structure and properties of crystals including defects based on ab-initio accurate simulations is essential for unraveling the nano-scale mechanisms that control the micromechanical and macroscopic behaviour…

Artificial neural networks have recently shown great results in many disciplines and a variety of applications, including natural language understanding, speech processing, games and image data generation. One particular application in…

Computer Vision and Pattern Recognition · Computer Science 2018-03-07 Felix Altenberger , Claus Lenz

In this paper, we evaluate convolutional neural network (CNN) features using the AlexNet architecture and very deep convolutional network (VGGNet) architecture. To date, most CNN researchers have employed the last layers before output,…

Computer Vision and Pattern Recognition · Computer Science 2015-09-28 Hirokatsu Kataoka , Kenji Iwata , Yutaka Satoh

The anatomical location of imaging features is of crucial importance for accurate diagnosis in many medical tasks. Convolutional neural networks (CNN) have had huge successes in computer vision, but they lack the natural ability to…

Computer Vision and Pattern Recognition · Computer Science 2016-11-01 Mohsen Ghafoorian , Nico Karssemeijer , Tom Heskes , Inge van Uden , Clara Sanchez , Geert Litjens , Frank-Erik de Leeuw , Bram van Ginneken , Elena Marchiori , Bram Platel

Deep learning has made important contributions to the development of medical image segmentation. Convolutional neural networks, as a crucial branch, have attracted strong attention from researchers. Through the tireless efforts of numerous…

Image and Video Processing · Electrical Eng. & Systems 2024-05-02 Zhaojin Fu , Zheng Chen , Jinjiang Li , Lu Ren

Density functional theory (DFT) is one of the main methods in Quantum Chemistry that offers an attractive trade off between the cost and accuracy of quantum chemical computations. The electron density plays a key role in DFT. In this work,…

Chemical Physics · Physics 2018-09-11 Anton V. Sinitskiy , Vijay S. Pande

In this article we investigate the efficiency of deep learning algorithms in solving the task of detecting anatomical reference points on radiological images of the head in lateral projection using a fully convolutional neural network and a…

Image and Video Processing · Electrical Eng. & Systems 2020-06-19 Konstantin Dobratulin , Andrey Gaidel , Irina Aupova , Anna Ivleva , Aleksandr Kapishnikov , Pavel Zelter

In this paper, we consider domain-invariant deep learning by explicitly modeling domain shifts with only a small amount of domain-specific parameters in a Convolutional Neural Network (CNN). By exploiting the observation that a…

Machine Learning · Computer Science 2020-09-30 Ze Wang , Xiuyuan Cheng , Guillermo Sapiro , Qiang Qiu

In this paper, various structures and methods of Deep Artificial Neural Networks (DNN) will be evaluated and compared for the purpose of continuous Persian speech recognition. One of the first models of neural networks used in speech…

Audio and Speech Processing · Electrical Eng. & Systems 2021-05-06 Arash Dehghani , Seyyed Ali Seyyedsalehi

Due to cellular heterogeneity, cell nuclei classification, segmentation, and detection from pathological images are challenging tasks. In the last few years, Deep Convolutional Neural Networks (DCNN) approaches have been shown…

Computer Vision and Pattern Recognition · Computer Science 2018-11-09 Md Zahangir Alom , Chris Yakopcic , Tarek M. Taha , Vijayan K. Asari

Neural Architecture Search (NAS) is quickly becoming the go-to approach to optimize the structure of Deep Learning (DL) models for complex tasks such as Image Classification or Object Detection. However, many other relevant applications of…

Porting state of the art deep learning algorithms to resource constrained compute platforms (e.g. VR, AR, wearables) is extremely challenging. We propose a fast, compact, and accurate model for convolutional neural networks that enables…

Computer Vision and Pattern Recognition · Computer Science 2017-06-14 Hessam Bagherinezhad , Mohammad Rastegari , Ali Farhadi

Biological data including gene expression data are generally high-dimensional and require efficient, generalizable, and scalable machine-learning methods to discover their complex nonlinear patterns. The recent advances in machine learning…

Machine Learning · Computer Science 2020-12-21 Dinesh Singh , Héctor Climente-González , Mathis Petrovich , Eiryo Kawakami , Makoto Yamada