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These are notes for a set of 7 two-hour lectures given at the 2010 Summer School on Quantitative Evolutionary and Comparative Genomics at OIST, Okinawa, Japan. The emphasis is on understanding how biological systems process information. We…

Molecular Networks · Quantitative Biology 2010-06-23 Gašper Tkačik

Motivated by applications to mathematical biology, we study the averaging problem for slow-fast systems, {\em in the case in which the fast dynamics is a stochastic process with multiple invariant measures}. We consider both the case in…

Probability · Mathematics 2023-08-17 B. D. Goddard , M. Ottobre , K. J. Painter , I. Souttar

We study nonequilibrium properties of small and chaotic quantum systems, i.e., non-integrable systems whose size is small in the sense that the separations of energy levels are non-negligible as compared with other relevant energy scales.…

chao-dyn · Physics 2007-05-23 Yasuhiro Higashiyama , Akira Shimizu

These are notes based on lectures given at the 2021 summer school on Fundamental Problems in Statistical Physics XV. Their purpose is to give a very brief introduction to Generalized Hydrodynamics, which provides a description of the large…

Statistical Mechanics · Physics 2023-06-30 Fabian H L Essler

In this paper, we study dynamical properties as hypercyclicity, supercyclicity, frequent hypercyclicity and chaoticity for transition operators associated to countable irreductible Markov chains. As particular cases, we consider simple…

Dynamical Systems · Mathematics 2017-04-17 Ali Messaoudi , Glauco Valle

This text is a slightly edited version of lecture notes for a course I gave at ETH, during the Winter term 2000-2001, to undergraduate Mathematics and Physics students. Contents: Chapter 1 - Examples of Dynamical Systems Chapter 2 -…

History and Overview · Mathematics 2007-05-23 Nils Berglund

In our previous publication [Kogan et al, Phys. Rev. {\bf 48}, 9404 (1993)] we considered the issue of statistics of radiation diffusively propagating in a disordered medium. The consideration was in the framework of diagrammatic techniques…

Condensed Matter · Physics 2009-10-22 Eugene Kogan , Moshe Kaveh

We describe the application of tools from statistical mechanics to analyse the dynamics of various classes of supervised learning rules in perceptrons. The character of this paper is mostly that of a cross between a biased non-encyclopedic…

Disordered Systems and Neural Networks · Physics 2008-02-03 C. W. H. Mace , A. C. C. Coolen

The fundamentals of Statistical Mechanics require a fresh definition in the context of the developments in Classical Mechanics of integrable and chaotic systems. This is done with the introduction of Micro Partitions ; a union of disjoint…

Statistical Mechanics · Physics 2007-05-23 Ajay Patwardhan

Distinguishability and, by extension, observability are key properties of dynamical systems. Establishing these properties is challenging, especially when no analytical model is available and they are to be inferred directly from…

Systems and Control · Electrical Eng. & Systems 2024-06-10 Pierre-François Massiani , Mona Buisson-Fenet , Friedrich Solowjow , Florent Di Meglio , Sebastian Trimpe

Inference on unknown quantities in dynamical systems via observational data is essential for providing meaningful insight, furnishing accurate predictions, enabling robust control, and establishing appropriate designs for future…

Methodology · Statistics 2018-02-06 M. Chung , M. Binois , R. B. Gramacy , D. J. Moquin , A. P. Smith , A. M. Smith

Many biological phenomena such as locomotion, circadian cycles, and breathing are rhythmic in nature and can be modeled as rhythmic dynamical systems. Dynamical systems modeling often involves neglecting certain characteristics of a…

Dynamical Systems · Mathematics 2016-01-20 M. Mert Ankaralı , Shahin Sefati , Manu S. Madhav , Andrew Long , Amy J. Bastian , Noah J. Cowan

The purpose of this manuscript is to review my recent activity on three main research topics. The first concerns the nature of low temperature amorphous solids and their relation with the spin glass transition in a magnetic field. This is…

Disordered Systems and Neural Networks · Physics 2024-05-13 Pierfrancesco Urbani

The interrelation of dynamic processes active on separated time-scales in glasses and viscous liquids is investigated using a model displaying two time-scale bifurcations both between fast and secondary relaxation and between secondary and…

Disordered Systems and Neural Networks · Physics 2015-03-19 Andrea Crisanti , Luca Leuzzi , Matteo Paoluzzi

Using equilibrium fluctuations to understand the response of a physical system to an externally imposed perturbation is the basis for linear response theory, which is widely used to interpret experiments and shed light on microscopic…

Statistical Mechanics · Physics 2024-06-24 Jérémie Klinger , Grant M. Rotskoff

These lecture notes present an overview of equilibrium statistical mechanics of classical fluids, with special applications to the structural and thermodynamic properties of systems made of particles interacting via the hard-sphere…

Soft Condensed Matter · Physics 2014-06-24 Andrés Santos

Dynamical symmetries are of considerable importance in elucidating the complex behaviour of strongly interacting systems with many degrees of freedom. Paradigmatic examples are cooperative phenomena as they arise in phase transitions, where…

Mathematical Physics · Physics 2015-11-16 Malte Henkel

The equilibrium state of a system consisting of a large number of strongly interacting electrons can be characterized by its density operator. This gives a direct access to the ground-state energy or, at finite temperatures, to the free…

Strongly Correlated Electrons · Physics 2012-02-23 Michael Potthoff

We studied topological and metric properties of the so-called interval translation maps (ITMs). For these maps, we introduced the maximal invariant measure and study its properties. Further, we study how the invariant measures depend on the…

Dynamical Systems · Mathematics 2021-06-25 Sergey Kryzhevich , Viktor Avrutin , Nikita Begun , Dmitrii Rachinskii , Khosro Tajbakhsh

In some inferential statistical methods, such as tests and confidence intervals, it is important to describe the stochastic behavior of statistical functionals, aside from their large sample properties. We study such behavior in terms of…

Statistics Theory · Mathematics 2022-10-25 Tommaso Lando , Idir Arab , Paulo Eduardo Oliveira