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In adaptive-bias enhanced sampling methods, a bias potential is added to the system to drive transitions between metastable states. The bias potential is a function of a few collective variables and is gradually modified according to the…

Computational Physics · Physics 2022-05-30 Michele Invernizzi , Michele Parrinello

Free-energy-based adaptive biasing methods, such as Metadynamics, the Adaptive Biasing Force (ABF) and their variants, are enhanced sampling algorithms widely used in molecular simulations. Although their efficiency has been empirically…

Probability · Mathematics 2026-01-29 Tony Lelièvre , Xuyang Lin , Pierre Monmarché

The simulation of rare events is one of the key problems in atomistic simulations. Towards its solution a plethora of methods have been proposed. Here we combine two such methods metadynamics and inte-grated tempering sampling. In…

Chemical Physics · Physics 2018-10-29 Yi Isaac Yang , Haiyang Niu , Michele Parrinello

The dielectric layers surrounding a metasurface have a large impact on its frequency and angular response. The notion of effective permittivity captures this dependence by suggesting that a layered dielectric environment will perturb…

Applied Physics · Physics 2024-10-24 Christopher T. Howard , William D. Hunt , Kenneth W. Allen

This work studies the dependence of the solution with respect to interface geometric perturbations in a multiscaled coupled Darcy flow system in direct variational formulation. A set of admissible perturbation functions and a sense of…

Analysis of PDEs · Mathematics 2020-08-21 Fernando A Morales

The conception of new metamaterials showing unorthodox behaviors with respect to elastic wavepropagation has become possible in recent years thanks to powerful dynamical homogenization techniques. Such methods effectively allow to describe…

This work introduces a formulation of model predictive control (MPC) which adaptively reasons about the complexity of the model based on the task while maintaining feasibility and stability guarantees. Existing MPC implementations often…

Robotics · Computer Science 2024-11-07 Joseph Norby , Ardalan Tajbakhsh , Yanhao Yang , Aaron M. Johnson

The boundary integral method is an efficient approach for solving time-harmonic obstacle scattering problems by a bounded scatterer. This paper presents the directional preconditioner for the iterative solution of linear systems of the…

Numerical Analysis · Mathematics 2014-09-17 Lexing Ying

When combining data sets to perform parameter inference, the results will be unreliable if there are unknown systematics in data or models. Here we introduce a flexible methodology, BACCUS: BAyesian Conservative Constraints and Unknown…

Cosmology and Nongalactic Astrophysics · Physics 2018-07-04 José Luis Bernal , John A. Peacock

Multiscale modeling of complex systems is crucial for understanding their intricacies. Data-driven multiscale modeling has emerged as a promising approach to tackle challenges associated with complex systems. On the other hand,…

Machine Learning · Computer Science 2024-03-26 Ruyi Tao , Ningning Tao , Yi-zhuang You , Jiang Zhang

Spinodal metamaterials, with architectures inspired by natural phase-separation processes, have presented a significant alternative to periodic and symmetric morphologies when designing mechanical metamaterials with extreme performance.…

Computational Engineering, Finance, and Science · Computer Science 2025-01-10 Prakash Thakolkaran , Michael A. Espinal , Somayajulu Dhulipala , Siddhant Kumar , Carlos M. Portela

Auxiliary nanostructures introduce additional flexibility into optomechanical manipulation schemes. Metamaterials and metasurfaces capable to control electromagnetic interactions at the near-field regions are especially beneficial for…

We consider complex dynamical systems showing metastable behavior but no local separation of fast and slow time scales. The article raises the question of whether such systems exhibit a low-dimensional manifold supporting its effective…

Dynamical Systems · Mathematics 2019-07-10 Andreas Bittracher , Péter Koltai , Stefan Klus , Ralf Banisch , Michael Dellnitz , Christof Schütte

Methane gas hydrates have increasingly become a topic of interest because of their potential as a future energy resource. There are significant economical and environmental risks associated with extraction from hydrate reservoirs, so a…

Numerical Analysis · Mathematics 2019-08-28 Mario Teixeira Parente , Steven Mattis , Shubhangi Gupta , Christian Deusner , Barbara Wohlmuth

A general technique for synthesizing both planar and conformal beamforming metasurfaces is presented that utilizes full-wave modeling techniques and rapid optimization methods. The synthesized metasurfaces consist of a patterned metallic…

Optics · Physics 2022-06-22 Jordan Budhu , Luke Szymanski , Anthony Grbic

A multiscale theory of interacting continuum mechanics and thermodynamics of mixtures of fluids, electrodynamics, polarization and magnetization is proposed. The mechanical (reversible) part of the theory is constructed in a purely…

Classical Physics · Physics 2020-08-26 Petr Vagner , Michal Pavelka , Ogul Esen

We have developed the {\it general method} for the description of {\it separatrix chaos}, basing on the analysis of the separatrix map dynamics. Matching it with the resonant Hamiltonian analysis, we show that, for a given amplitude of…

Chaotic Dynamics · Physics 2007-11-01 S. M. Soskin , R. Mannella , O. M. Yevtushenko

Recently, gradient-based discrete sampling has emerged as a highly efficient, general-purpose solver for various combinatorial optimization (CO) problems, achieving performance comparable to or surpassing the popular data-driven approaches.…

Machine Learning · Statistics 2025-03-07 Muheng Li , Ruqi Zhang

Dissipative particle dynamics (DPD) belongs to a class of models and computational algorithms developed to address mesoscale problems in complex fluids and soft matter in general. It is based on the notion of particles that represent…

Statistical Mechanics · Physics 2017-05-24 Pep Español , Patrick B Warren

Combined-resolution simulations are an effective way to study molecular properties across a range of length- and time-scales. These simulations can benefit from adaptive boundaries that allow the high-resolution region to adapt (change size…

Computational Physics · Physics 2018-05-09 Jason A. Wagoner , Vijay S. Pande