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Planktonic active matter represents an emergent system spanning different scales: individual, population and community; and complexity arising from sub-cellular and cellular to collective and ecosystem scale dynamics. This cross-scale…

Biological Physics · Physics 2023-01-24 Anupam Sengupta

We introduce an analytical model for population dynamics with intra-specific competition, mutation and assortative mating as basic ingredients. The set of equations that describes the time evolution of population size in a mean-field…

Populations and Evolution · Quantitative Biology 2015-06-26 V. Schwämmle , K. Luz-Burgoa , J. S. Sá Martins , S. Moss de Oliveira

Intercellular exchange networks are essential for the adaptive capabilities of populations of cells. While diffusional exchanges have traditionally been difficult to map, recent advances in nanotechnology enable precise probing of exchange…

Statistical Mechanics · Physics 2024-12-13 Luís C. F. Latoski , Andrea De Martino , Daniele De Martino

We study a monomer-dimer model with repulsive interactions between the same species in one dimension. With infinitely strong interactions the model exhibits a continuous transition from a reactive phase to an inactive phase with two…

Condensed Matter · Physics 2007-05-23 Hyunggyu Park

Motivated by recent findings, we discuss the existence of a direct and robust mechanism providing discontinuous absorbing transitions in short range systems with single species, with no extra symmetries or conservation laws. We consider…

Statistical Mechanics · Physics 2014-02-10 Carlos E. Fiore

The one-dimensional kinetic contact process with parallel update is introduced and studied by Monte Carlo simulations. This process is proposed to describe the plant population replication and epidemic disease spreading among them. The…

Statistical Mechanics · Physics 2008-04-22 P. N. Timonin , G. Y. Chitov

We find conditions required to achieve complete population transfer, via coherent population trapping, from an initial state to a designated final state at a designated time in a degenerate 3-level atom, where transitions are caused by an…

Quantum Physics · Physics 2009-11-10 Kh. Yu. Rakhimov , J. H. McGuire , Kh. Kh. Shakov

Switching interacting particle systems studied in probability theory are the stochastic processes of hopping particles on a lattice made up of slow and fast particles, where the switching between these types of particles occurs randomly at…

Statistical Mechanics · Physics 2024-05-14 Ayana Ezoe , Saori Morimoto , Yuya Tanaka , Makoto Katori , Hiraku Nishimori

We consider the ordering dynamics of the Ising model on a square lattice where an additional fixed number of bonds connect any two sites chosen randomly. The total number of shortcuts added is controlled by two parameters $p$ and $\alpha$.…

Statistical Mechanics · Physics 2021-12-10 Pratik Mullick , Parongama Sen

We propose a model to characterize how a diffusing population adapts under a time periodic selection, while its environment undergoes shifts and size changes, leading to significant differences with classical results on fixed domains. After…

Analysis of PDEs · Mathematics 2025-06-05 Matthieu Alfaro , Adel Blouza , Nessim Dhaouadi

The biological theory of adaptive dynamics proposes a description of the long-term evolution of a structured asexual population. It is based on the assumptions of large population, rare mutations and small mutation steps, that lead to a…

Probability · Mathematics 2007-05-23 Nicolas Champagnat , Amaury Lambert

An important component in studying mathematical models in many biochemical systems, such as those found in developmental biology, is phase transition. The purpose of this work is to analyze the phase transition property of a…

Analysis of PDEs · Mathematics 2013-12-19 Masoud Yari

Population dynamics reflects an underlying birth-death process, where the rates associated with different events may depend on external environmental conditions and on the population density. A whole family of simple and popular…

Populations and Evolution · Quantitative Biology 2019-07-03 Yitzhak Yahalom , Bnaya Steinmetz , Nadav M. Shnerb

We study a lattice model where the coupling stochastically switches between repulsive (subtractive) and attractive (additive) at each site with probability p at every time instance. We observe that such kind of coupling stabilizes the local…

Chaotic Dynamics · Physics 2011-04-01 Abhijeet R. Sonawane

We identify the phase of a cycle as a new critical factor for tipping points (critical transitions) in cyclic systems subject to time-varying external conditions. As an example, we consider how contemporary climate variability induces…

Dynamical Systems · Mathematics 2021-10-11 Hassan Alkhayuon , Rebecca C. Tyson , Sebastian Wieczorek

The process of evolutionary emergence of purposeful adaptive behavior is investigated by means of computer simulations. The model proposed implies that there is an evolving population of simple agents, which have two natural needs: energy…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Mikhail S. Burtsev , Vladimir G. Redko , Roman V. Gusarev

We study a probabilistic cellular automaton to describe two population biology problems: the threshold of species coexistence in a predator-prey system and the spreading of an epidemic in a population. By carrying out time-dependent…

Statistical Mechanics · Physics 2015-06-25 Everaldo Arashiro , Tania Tome

A one-dimensional model on a line of the length L is investigated, which involves particle diffusion as well as single particle annihilation. There are also creation and annihilation at the boundaries. The static and dynamical behaviors of…

Mathematical Physics · Physics 2014-03-17 Mohammad Khorrami , Amir Aghamohammadi

We study the effect of interfacial phenomena in two-dimensional perfect and random (or disordered) $q$-state Potts models with continuous phase transitions, using, mainly, Monte Carlo techniques. In particular, for the total interfacial…

Statistical Mechanics · Physics 2015-08-10 N. G. Fytas , A. Malakis , W. Selke , L. N. Shchur

Based on quasi-stationary distribution ideas, a general finite size scaling theory is proposed for discontinuous nonequilibrium phase transitions into absorbing states. Analogously to the equilibrium case, we show that quantities such as,…

Statistical Mechanics · Physics 2015-12-23 M. M. de Oliveira , M. G. E. da Luz , C. E. Fiore