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Related papers: iotools: High-Performance I/O Tools for R

200 papers

We present MXtalTools, a flexible Python package for the data-driven modelling of molecular crystals, facilitating machine learning studies of the molecular solid state. MXtalTools comprises several classes of utilities: (1) synthesis,…

Machine Learning · Computer Science 2025-11-26 Michael Kilgour , Mark E. Tuckerman , Jutta Rogal

The objective of Information Extraction (IE) is to derive structured representations from unstructured or semi-structured documents. However, developing IE models is complex due to the need of integrating several subtasks. Additionally,…

Information Retrieval · Computer Science 2024-06-04 Arne Binder , Leonhard Hennig , Christoph Alt

The Information Dynamics Toolkit xl (IDTxl) is a comprehensive software package for efficient inference of networks and their node dynamics from multivariate time series data using information theory. IDTxl provides functionality to…

$clustertools$ is a Python package for analyzing star cluster simulations. The package is built around the $StarCluster$ class, which stores all data read in from the snapshot of a given model star cluster. The package contains functions…

Astrophysics of Galaxies · Physics 2023-05-22 Jeremy J. Webb

Static program slicing is a fundamental technique in software engineering. Traditional static slicing tools rely on parsing complete source code, which limits their applicability to real-world scenarios where code snippets are incomplete or…

Software Engineering · Computer Science 2025-09-23 Pengfei He , Shaowei Wang , Tse-Hsun Chen

R is a language and environment for statistical computing and graphics, which provides a wide variety of statistical tools (modeling, statistical testing, time series analysis, classification problems, machine learning, ...), together with…

Other Statistics · Statistics 2023-06-22 M. Isabel Parra , Eva L. Sanjuán , M. Carmen Robustillo , Mario M. Pizarro

Open-ended assignments - such as lab reports and semester-long projects - provide data science and statistics students with opportunities for developing communication, critical thinking, and creativity skills. However, providing grades and…

Other Statistics · Statistics 2025-01-15 Federica Zoe Ricci , Catalina Mari Medina , Mine Dogucu

The amazing advances being made in the fields of machine and deep learning are a highlight of the Big Data era for both enterprise and research communities. Modern applications require resources beyond a single node's ability to provide.…

Scientific workflow management systems offer features for composing complex computational pipelines from modular building blocks, for executing the resulting automated workflows, and for recording the provenance of data products resulting…

Task-based programming models are excellent tools to parallelize and seamlessly load balance an application workload. However, the integration of I/O intensive applications and task-based programming models is lacking. Typically, I/O…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-30 Aleix Roca Nonell , Vicenç Beltran Querol , Sergi Mateo Bellido

We present DIO, a generic tool for observing inefficient and erroneous I/O interactions between applications and in-kernel storage systems that lead to performance, dependability, and correctness issues. DIO facilitates the analysis and…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-04-19 Tânia Esteves , Ricardo Macedo , Rui Oliveira , João Paulo

IoT applications usually rely on cloud computing services to perform data analysis such as filtering, aggregation, classification, pattern detection, and prediction. When applied to specific domains, the IoT needs to deal with unique…

Signal Processing · Electrical Eng. & Systems 2022-05-09 Márcio Miguel Gomes , Rodrigo da Rosa Righi , Cristiano André da Costa , Dalvan Griebler

collapse is a large C/C++-based infrastructure package facilitating complex statistical computing, data transformation, and exploration tasks in R - at outstanding levels of performance and memory efficiency. It also implements a…

Computation · Statistics 2025-06-02 Sebastian Krantz

A lot of research relies on data analysis scripts to process, clean, and visualize data. However, recent studies show that these scripts are often hard to comprehend and maintain, hindering reproducibility and reuse, accompanied by a lack…

Software Engineering · Computer Science 2026-04-20 Florian Sihler , Oliver Gerstl , Lars Pfrenger , Julian Schubert , Matthias Tichy

The 21st century has witnessed a growing interest in the analysis of time series data. Whereas most of the literature on the topic deals with real-valued time series, ordinal time series have typically received much less attention. However,…

Machine Learning · Statistics 2023-04-25 Ángel López Oriona , José Antonio Vilar Fernández

Driven by artificial intelligence, data science, and high-resolution simulations, I/O workloads and hardware on high-performance computing (HPC) systems have become increasingly complex. This complexity can lead to large I/O overheads and…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-01-03 Hammad Ather , Jean Luca Bez , Chen Wang , Hank Childs , Allen D. Malony , Suren Byna

Methods: We have developed a software suite (DataSet Tracker) for real-time analysis designed to run on computers, smartphones, and smart glasses hardware and suitable for resource-constrained, on-the-fly computing in microscopes without…

Quantitative Methods · Quantitative Biology 2025-08-13 Alexandre Matov

Digital audio processing tools offer music researchers the opportunity to examine both non-notated music and music as performance. This chapter summarises the types of information that can be extracted from audio as well as currently…

Sound · Computer Science 2021-11-10 Johanna Devaney

I present an R package called edibble that facilitates the design of experiments by encapsulating elements of the experiment in a series of composable functions. This package is an interpretation of "the grammar of experimental designs" by…

Computation · Statistics 2023-11-17 Emi Tanaka

Evaluating forecasts is essential to understand and improve forecasting and make forecasts useful to decision makers. A variety of R packages provide a broad variety of scoring rules, visualisations and diagnostic tools. One particular…

Methodology · Statistics 2024-11-04 Nikos I. Bosse , Hugo Gruson , Anne Cori , Edwin van Leeuwen , Sebastian Funk , Sam Abbott