Related papers: Techniques for the Cograph Editing Problem: Module…
Best match graphs (BMGs) are a class of colored digraphs that naturally appear in mathematical phylogenetics and can be approximated with the help of similarity measures between gene sequences, albeit not without errors. The corresponding…
The Cluster Editing problem seeks a transformation of a given undirected graph into a disjoint union of cliques via a minimum number of edge additions or deletions. A multi-parameterized version of the problem is studied, featuring a number…
We consider edge modification problems towards block and strictly chordal graphs, where one is given an undirected graph $G = (V,E)$ and an integer $k \in \mathbb{N}$ and seeks to edit (add or delete) at most $k$ edges from $G$ to obtain a…
We study an extension of the classical graph cut problem, wherein we replace the modular (sum of edge weights) cost function by a submodular set function defined over graph edges. Special cases of this problem have appeared in different…
We investigate the problem of modifying a graph into a connected graph in which the degree of each vertex satisfies a prescribed parity constraint. Let $ea$, $ed$ and $vd$ denote the operations edge addition, edge deletion and vertex…
Many fixed-parameter tractable algorithms using a bounded search tree have been repeatedly improved, often by describing a larger number of branching rules involving an increasingly complex case analysis. We introduce a novel and general…
A class $\mathcal{G}$ of graphs is called hereditary if it is closed under taking induced subgraphs. We denote by $\mathcal{G}^\mathrm{apex}$ the class of graphs $G$ that contain a vertex $v$ such that $G-v$ is in $\mathcal{G}$. We prove…
The classic Cluster Editing problem (also known as Correlation Clustering) asks to transform a given graph into a disjoint union of cliques (clusters) by a small number of edge modifications. When applied to vertex-colored graphs (the…
This paper introduces the notion of involution module, the first generalization of the modular decomposition of 2-structure which has a unique linear-sized decomposition tree. We derive an O(n^2) decomposition algorithm and we take…
We investigate the parameterized complexity of the graph editing problem called Editing to a Graph with a Given Degree Sequence, where the aim is to obtain a graph with a given degree sequence \sigma by at most k vertex or edge deletions…
Many computational problems admit fast algorithms on special inputs, however, the required properties might be quite restrictive. E.g., many graph problems can be solved much faster on interval or cographs, or on graphs of small…
In this paper we introduce a natural generalization of the well-known problems Cluster Editing and Bicluster Editing, whose parameterized versions have been intensively investigated in the recent literature. The generalized problem, called…
A dominating induced matching, also called an efficient edge domination, of a graph $G=(V,E)$ with $n=|V|$ vertices and $m=|E|$ edges is a subset $F \subseteq E$ of edges in the graph such that no two edges in $F$ share a common endpoint…
Suppose a finite, unweighted, combinatorial graph $G = (V,E)$ is the union of several (degree-)regular graphs which are then additionally connected with a few additional edges. $G$ will then have only a small number of vertices $v \in V$…
Given a graph G = (V,E) and an integer k, an edge modification problem for a graph property P consists in deciding whether there exists a set of edges F of size at most k such that the graph H = (V,E \vartriangle F) satisfies the property…
Given a graph $G=(V,E)$ and an integer $k$, the Cluster Editing problem asks whether we can transform $G$ into a union of vertex-disjoint cliques by at most $k$ modifications (edge deletions or insertions). In this paper, we study the…
Subgraph matching is a NP-complete problem that extracts isomorphic embeddings of a query graph $q$ in a data graph $G$. In this paper, we present a framework with three components: Preprocessing, Reordering and Enumeration. While pruning…
Cographs--defined most simply as complete graphs with colored lines--both dualize and generalize ordinary graphs, and promise a comparably wide range of applications. This article introduces them by examples, catalogues, and elementary…
We study provably effective and efficient data reduction for a class of NP-hard graph modification problems based on vertex degree properties. We show fixed-parameter tractability for NP-hard graph completion (that is, edge addition) cases…
Correlation clustering seeks a partition of the vertex set of a given graph/network into groups of closely related, or just close enough, vertices so that elements of different groups are not close to each other. The problem has been…