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Shape-based metrics measure how faithfully a drawing D represents the structure of a graph G, using the proximity graph S of D. While some limited graph classes admit proximity drawings (i.e., optimally shape-faithful drawings, where S =…

Data Structures and Algorithms · Computer Science 2022-08-31 Amyra Meidiana , Seok-Hee Hong , Peter Eades

Graph drawing is a fundamental task in information visualization, with the Fruchterman--Reingold (FR) force model being one of the most popular choices. We can interpret this visualization task as a continuous optimization problem, which…

Computational Geometry · Computer Science 2025-03-04 Hiroki Hamaguchi , Naoki Marumo , Akiko Takeda

The graphical notion of effective resistance has found wide-ranging applications in many areas of pure mathematics, applied mathematics and control theory. By the nature of its construction, effective resistance can only be computed in…

Optimization and Control · Mathematics 2013-10-23 George Forrest Young , Luca Scardovi , Naomi Ehrich Leonard

A straight-line drawing of a graph is a monotone drawing if for each pair of vertices there is a path which is monotonically increasing in some direction, and it is called a strongly monotone drawing if the direction of monotonicity is…

Computational Geometry · Computer Science 2016-01-08 Stefan Felsner , Alexander Igamberdiev , Philipp Kindermann , Boris Klemz , Tamara Mchedlidze , Manfred Scheucher

Efficient layout of large-scale graphs remains a challenging problem: the force-directed and dimensionality reduction-based methods suffer from high overhead for graph distance and gradient computation. In this paper, we present a new graph…

Social and Information Networks · Computer Science 2020-08-19 Minfeng Zhu , Wei Chen , Yuanzhe Hu , Yuxuan Hou , Liangjun Liu , Kaiyuan Zhang

Force-directed (FD) algorithms can be used to explore relationships in social networks, visualize money markets, and analyze transaction networks. However, FD algorithms are mainly designed for visualizing static graphs in which the…

Social and Information Networks · Computer Science 2022-04-04 Se-Hang Cheong , Yain-Whar Si

In this paper we give fast distributed graph algorithms for detecting and listing small subgraphs, and for computing or approximating the girth. Our algorithms improve upon the state of the art by polynomial factors, and for girth, we…

Data Structures and Algorithms · Computer Science 2021-01-20 Keren Censor-Hillel , Orr Fischer , Tzlil Gonen , François Le Gall , Dean Leitersdorf , Rotem Oshman

Force-directed layout methods constitute the most common approach to draw general graphs. Among them, stress minimization produces layouts of comparatively high quality but also imposes comparatively high computational demands. We propose a…

Computational Geometry · Computer Science 2016-11-29 Mark Ortmann , Mirza Klimenta , Ulrik Brandes

In this paper we study the problem of designing a distributed graph visualization algorithm for large graphs. The algorithm must be simple to implement and the computing infrastructure must not require major hardware or software…

Data Structures and Algorithms · Computer Science 2016-06-08 Alessio Arleo , Walter Didimo , Giuseppe Liotta , Fabrizio Montecchiani

Graphs are often used to model relationships between entities. The identification and visualization of clusters in graphs enable insight discovery in many application areas, such as life sciences and social sciences. Force-directed graph…

Human-Computer Interaction · Computer Science 2024-08-22 Nora Al-Naami , Nicolas Médoc , Matteo Magnani , Mohammad Ghoniem

In this paper, we introduce a new approach for drawing diagrams that have applications in software visualization. Our approach is to use a technique we call confluent drawing for visualizing non-planar diagrams in a planar way. This…

Computational Geometry · Computer Science 2007-05-23 Matthew Dickerson , David Eppstein , Michael T. Goodrich , Jeremy Meng

Graphs are a natural representation for systems based on relations between connected entities. Combinatorial optimization problems, which arise when considering an objective function related to a process of interest on discrete structures,…

Machine Learning · Computer Science 2024-08-21 Victor-Alexandru Darvariu , Stephen Hailes , Mirco Musolesi

Graphs naturally appear in several real-world contexts including social networks, the web network, and telecommunication networks. While the analysis and the understanding of graph structures have been a central area of study in algorithm…

Data Structures and Algorithms · Computer Science 2019-09-17 Gramoz Goranci

Bach et al. [1] recently presented an algorithm for constructing confluent drawings, by leveraging power graph decomposition to generate an auxiliary routing graph. We identify two issues with their method which we call the node split and…

Computational Geometry · Computer Science 2019-09-04 Jonathan X. Zheng , Samraat Pawar , Dan F. M. Goodman

We explore various techniques to incorporate grid-like layout conventions into a force-directed, constraint-based graph layout framework. In doing so we are able to provide high-quality layout---with predominantly axis-aligned edges---that…

Human-Computer Interaction · Computer Science 2013-08-30 Steve Kieffer , Tim Dwyer , Kim Marriott , Michael Wybrow

This research provides algorithms and numerical methods to geometrically control the magnitude of the internal and external forces in the reciprocal diagrams of 3D/Polyhedral Graphic statics (3DGS). In 3DGS, the form of the structure and…

Computational Geometry · Computer Science 2020-07-31 Masoud Akbarzadeh , Marton Hablicsek

In this paper, we introduce a method called graph fusion embedding, designed for multi-graph embedding with shared vertex sets. Under the framework of supervised learning, our method exhibits a remarkable and highly desirable synergistic…

Social and Information Networks · Computer Science 2024-06-27 Cencheng Shen , Carey E. Priebe , Jonathan Larson , Ha Trinh

We address the efficiency issue for the construction of a deep graph neural network (GNN). The approach exploits the idea of representing each input graph as a fixed point of a dynamical system (implemented through a recurrent neural…

Machine Learning · Computer Science 2019-11-21 Claudio Gallicchio , Alessio Micheli

This paper considers the problem of distributed optimization over time-varying graphs. For the case of undirected graphs, we introduce a distributed algorithm, referred to as DIGing, based on a combination of a distributed inexact gradient…

Optimization and Control · Mathematics 2017-03-21 Angelia Nedich , Alex Olshevsky , Wei Shi

In this paper, we present an on-line fully dynamic algorithm for maintaining strongly connected component of a directed graph in a shared memory architecture. The edges and vertices are added or deleted concurrently by fixed number of…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-04-11 Muktikanta Sa