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Complex systems in the real world can be modeled as a network of connected components. The human brain, as a network of neurons among which the interactions cause perception, is a complex network. Synchronization is a dynamical phenomenon…

Biological Physics · Physics 2019-04-30 Arefeh Mazarei , Mohammad Amirian Matlob , Gholamhossein Riazi , Yousef Jamali

We present a unified field-theoretic framework for the dynamics of activity and connectivity in interacting neuronal systems. Building upon previous works, where a field approach to activity--connectivity dynamics, formation of collective…

Neurons and Cognition · Quantitative Biology 2025-10-30 Pierre Gosselin , Aïleen Lotz

It is notoriously difficult to predict the behaviour of a complex self-organizing system, where the interactions among dynamical units form a heterogeneous topology. Even if the dynamics of each microscopic unit is known, a real…

Information Theory · Computer Science 2013-10-01 Rick Quax , Andrea Apolloni , Peter M. A. Sloot

Spatially or chemically isolated functional modules composed of several cellular components and carrying discrete functions are considered fundamental building blocks of cellular organization, but their presence in highly integrated…

Soft Condensed Matter · Physics 2009-11-07 E. Ravasz , A. L. Somera , D. A. Mongru , Z. N. Oltvai , A. -L. Barabasi

The relationship between network topology and system dynamics has significant implications for unifying our understanding of the interplay among metabolic, gene-regulatory, and ecosystem network architecures. Here we analyze the stability…

Populations and Evolution · Quantitative Biology 2015-06-17 Cameron Smith , Raymond S. Puzio , Aviv Bergman

How do complex adaptive systems, such as life, emerge from simple constituent parts? In the 1990s Walter Fontana and Leo Buss proposed a novel modeling approach to this question, based on a formal model of computation known as $\lambda$…

Adaptation and Self-Organizing Systems · Physics 2024-08-26 Cole Mathis , Devansh Patel , Westley Weimer , Stephanie Forrest

Transportation and distribution networks are a class of spatial networks that have been of interest in recent years. These networks are often characterized by the presence of complex structures such as central loops paired with peripheral…

Physics and Society · Physics 2023-01-23 Sebastiano Bontorin , Giulia Cencetti , Riccardo Gallotti , Bruno Lepri , Manlio De Domenico

Network science plays an increasingly important role to model complex data in many scientific disciplines. One notable feature of network organization is community structure, which refers to clusters of tightly interconnected nodes. A…

Social and Information Networks · Computer Science 2016-03-18 Dimitri Van De Ville

It is proposed that self-organisation (SO) in non-equilibrium systems is governed by a general principle: it emerges when a minute subset of system configurations are exceptionally stable and long-lived to survive the noise generated by the…

Statistical Mechanics · Physics 2026-04-20 Raphael Blumenfeld

The brain can be considered as a system that dynamically optimizes the structure of anatomical connections based on the efficiency requirements of functional connectivity. To illustrate the power of this principle in organizing the…

Neurons and Cognition · Quantitative Biology 2024-02-07 Carlos Calvo Tapia , Valeriy A. Makarov Slizneva , Cees van Leeuwen

We present a model for the time evolution of network architectures based on dynamical systems. We show that the evolution of the existence of a connection in a network can be described as a stochastic non-markovian telegraphic signal…

Adaptation and Self-Organizing Systems · Physics 2018-10-11 Pablo Kaluza

A self-organising model is proposed to explain the criticality in cortical networks deduced from recent observations of neuronal avalanches. Prevailing understanding of self-organised criticality (SOC) dictates that conservation of energy…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Dranreb Earl Juanico

Previous work has shown that species interacting in an ecosystem and actors transacting in an economic context may have notable similarities in behavior. However, the specific mechanism that may underlie similarities in nature and human…

Physics and Society · Physics 2011-10-04 Serguei Saavedra , Felix Reed-Tsochas , Brian Uzzi

Unraveling the interplay between connectivity and spatio-temporal dynamics in neuronal networks is a key step to advance our understanding of neuronal information processing. Here we investigate how particular features of network…

Neurons and Cognition · Quantitative Biology 2015-07-21 Michael T. Schaub , Yazan N. Billeh , Costas A. Anastassiou , Christof Koch , Mauricio Barahona

We examine the global organization of heterogeneous equilibrium networks consisting of a number of well distinguished interconnected parts--``communities'' or modules. We develop an analytical approach allowing us to obtain the statistics…

Statistical Mechanics · Physics 2009-11-13 S. N. Dorogovtsev , J. F. F. Mendes , A. N. Samukhin , A. Y. Zyuzin

To understand the formation, evolution, and function of complex systems, it is crucial to understand the internal organization of their interaction networks. Partly due to the impossibility of visualizing large complex networks, resolving…

Physics and Society · Physics 2011-11-30 Takashi Nishikawa , Adilson E. Motter

Reconstructing network connectivity from the collective dynamics of a system typically requires access to its complete continuous-time evolution although these are often experimentally inaccessible. Here we propose a theory for revealing…

Neurons and Cognition · Quantitative Biology 2018-08-08 Jose Casadiego , Dimitra Maoutsa , Marc Timme

Mechanisms of pattern formation---of which the Turing instability is an archetype---constitute an important class of dynamical processes occurring in biological, ecological and chemical systems. Recently, it has been shown that the Turing…

Disordered Systems and Neural Networks · Physics 2019-06-19 Sayat Mimar , Mariamo Mussa Juane , Juyong Park , Alberto P. Munuzuri , Gourab Ghoshal

Pattern formation and evolution in unsynchronizable complex networks are investigated. Due to the asymmetric topology, the synchronous patterns formed in complex networks are irregular and nonstationary. For coupling strength immediately…

Chaotic Dynamics · Physics 2007-05-23 Xingang Wang , Meng Zhan , Ghuguang Guan , Choy Heng Lai

Living neuronal networks in dissociated neuronal cultures are widely known for their ability to generate highly robust spatiotemporal activity patterns in various experimental conditions. These include neuronal avalanches satisfying the…

Adaptation and Self-Organizing Systems · Physics 2022-05-17 I. Y. Tyukin , D. Iudin , F. Iudin , T. Tyukina , V. Kazantsev , I. Mukhina , A. N. Gorban
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