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Topological data analysis is a relatively new branch of machine learning that excels in studying high dimensional data, and is theoretically known to be robust against noise. Meanwhile, data objects with mixed numeric and categorical…

Algebraic Topology · Mathematics 2020-06-15 Chengyuan Wu , Carol Anne Hargreaves

The relationship between the macroscopic response of the slope and the macrostructure of the force chain network under the action of the metal plate was studied by the particle discrete element method and the persistent homology. The…

Soft Condensed Matter · Physics 2020-10-20 Shengdong Zhang , Shihui You , Longfei Chen , Xiaofei Liu

Persistence-based topological optimization deforms a point cloud $X \subset \mathbb{R}^d$ by minimizing objectives of the form $L(X) = \ell(\mathrm{Dgm}(X))$, where $\mathrm{Dgm}(X)$ is a persistence diagram. In practice, optimization is…

Computational Geometry · Computer Science 2026-05-13 Abderrahim Bendahi , Alexandre Duplessis , Arnaud Fickinger

The field of mathematical morphology offers well-studied techniques for image processing. In this work, we view morphological operations through the lens of persistent homology, a tool at the heart of the field of topological data analysis.…

Computational Geometry · Computer Science 2021-03-25 Yu-Min Chung , Sarah Day , Chuan-Shen Hu

We address the problem of estimating multiple modes of a multivariate density using persistent homology, a central tool in Topological Data Analysis. We introduce a method based on the preliminary estimation of the $H_0$-persistence diagram…

Statistics Theory · Mathematics 2025-05-06 Hugo Henneuse

Persistent homology is a popular and powerful tool for capturing topological features of data. Advances in algorithms for computing persistent homology have reduced the computation time drastically -- as long as the algorithm does not…

Computational Geometry · Computer Science 2013-10-03 Ulrich Bauer , Michael Kerber , Jan Reininghaus

We introduce a consistent estimator for the homology (an algebraic structure representing connected components and cycles) of level sets of both density and regression functions. Our method is based on kernel estimation. We apply this…

Statistics Theory · Mathematics 2016-09-30 Omer Bobrowski , Sayan Mukherjee , Jonathan E. Taylor

Scientific data has been growing in both size and complexity across the modern physical, engineering, life and social sciences. Spatial structure, for example, is a hallmark of many of the most important real-world complex systems, but its…

The vast combination of material properties seen in nature are achieved by the complexity of the material microstructure. Advanced characterization and physics based simulation techniques have led to generation of extremely large…

Machine Learning · Computer Science 2023-01-12 Veera Sundararaghavan , Megna N. Shah , Jeff P. Simmons

Inferring topological and geometrical information from data can offer an alternative perspective on machine learning problems. Methods from topological data analysis, e.g., persistent homology, enable us to obtain such information,…

Computer Vision and Pattern Recognition · Computer Science 2018-02-19 Christoph Hofer , Roland Kwitt , Marc Niethammer , Andreas Uhl

Porous structures are materials consisting of minuscule pores, where the microstructure morphology significantly impacts their macroscopic properties. Integrating different porous structures through a blending method is indispensable to…

Graphics · Computer Science 2024-06-03 Depeng Gao , Yang Gao , Yuanzhi Zhang , Hongwei Lin

Materials with nanoscale phase separation are considered. These materials are formed by a mixture of several phases, so that inside one phase there exist nanosize inclusions of other phases, with random shapes and random spatial locations.…

Mesoscale and Nanoscale Physics · Physics 2014-03-31 V. I. Yukalov , E. P. Yukalova

In a system of many similar self-propelled entities such as flocks of birds, fish school, cells and molecules, the interactions with neighbors can lead to a "coherent state", meaning the formation of visually compelling aggregation patterns…

Applications · Statistics 2024-03-07 Thevasha Sathiyakumar , Shantanu Sur , Sumona Mondal , Marko Budišić

Persistent Homology is a powerful tool in Topological Data Analysis (TDA) to capture topological properties of data succinctly at different spatial resolutions. For graphical data, shape, and structure of the neighborhood of individual data…

Social and Information Networks · Computer Science 2018-11-12 Sumit Bhatia , Bapi Chatterjee , Deepak Nathani , Manohar Kaul

Topological Data Analysis (TDA) provides powerful tools to explore the shape and structure of data through topological features such as clusters, loops, and voids. Persistence diagrams are a cornerstone of TDA, capturing the evolution of…

Artificial Intelligence · Computer Science 2026-03-13 Alexander Mironenko , Evgeny. Burnaev , Serguei Barannikov

Metric graphs are ubiquitous in science and engineering. For example, many data are drawn from hidden spaces that are graph-like, such as the cosmic web. A metric graph offers one of the simplest yet still meaningful ways to represent the…

Computational Geometry · Computer Science 2017-12-05 Tamal K. Dey , Dayu Shi , Yusu Wang

We investigate the large-scale structure and temporal evolution of cyclonic and anticyclonic systems in the North Atlantic using persistent homology applied to daily sea-level pressure anomalies from the ERA5 reanalysis (1950-2022). By…

Atmospheric and Oceanic Physics · Physics 2025-11-26 Himanshu Yadav , Gisela D. Charó , Davide Faranda

Trophic coherence, a measure of a graph's hierarchical organisation, has been shown to be linked to a graph's structural and dynamical aspects such as cyclicity, stability and normality. Trophic levels of vertices can reveal their…

Physics and Society · Physics 2020-10-08 Giannis Moutsinas , Choudhry Shuaib , Weisi Guo , Stephen Jarvis

Topological data analysis (TDA), while abstract, allows a characterization of time-series data obtained from nonlinear and complex dynamical systems. Though it is surprising that such an abstract measure of structure - counting pieces and…

Computational Geometry · Computer Science 2020-01-07 Nicole Sanderson , Elliott Shugerman , Samantha Molnar , James D. Meiss , Elizabeth Bradley

In topological data analysis (TDA), one often studies the shape of data by constructing a filtered topological space, whose structure is then examined using persistent homology. However, a single filtered space often does not adequately…

Algebraic Topology · Mathematics 2023-03-14 Magnus Bakke Botnan , Michael Lesnick
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