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The paper provides a unified co-design of 1) a programming and execution model that allows spawning tasks from within the vertex data at runtime, 2) language constructs for \textit{actions} that send work to where the data resides,…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-09 Bibrak Qamar Chandio , Prateek Srivastava , Maciej Brodowicz , Martin Swany , Thomas Sterling

With many frameworks based on message passing neural networks proposed to predict molecular and bulk properties, machine learning methods have tremendously shifted the paradigms of computational sciences underpinning physics, material…

Machine Learning · Computer Science 2021-09-03 Zun Wang , Chong Wang , Sibo Zhao , Yong Xu , Shaogang Hao , Chang Yu Hsieh , Bing-Lin Gu , Wenhui Duan

The Holomorphic Embedding Load flow Method (HELM) employs complex analysis to solve the load flow problem. It guarantees finding the correct solution when it exists, and identifying when a solution does not exist. The method, however, is…

Optimization and Control · Mathematics 2020-02-27 Majid Heidarifar , Panagiotis Andrianesis , Michael Caramanis

In this paper, a diffusion-based molecular communication channel between two nano-machines is considered. The effect of the amount of memory on performance is characterized, and a simple memory-limited decoder is proposed and its…

Biological Physics · Physics 2014-05-05 Reza Mosayebi , Hamidreza Arjmandi , Amin Gohari , Masoumeh Nasiri Kenari , Urbashi Mitra

We propose Riemannian Flow Matching (RFM), a simple yet powerful framework for training continuous normalizing flows on manifolds. Existing methods for generative modeling on manifolds either require expensive simulation, are inherently…

Machine Learning · Computer Science 2024-02-27 Ricky T. Q. Chen , Yaron Lipman

Molecular Communications (MC) is a bio-inspired communication technique that uses molecules to encode and transfer information. Many efforts have been focused on developing new modulation techniques for MC by exploiting distinguishable…

Emerging Technologies · Computer Science 2022-05-27 M. Serkan Kopuzlu , M. Okan Araz , Ahmet R. Emirdagi , Murat Kuscu

Feed-forward neural networks consist of a sequence of layers, in which each layer performs some processing on the information from the previous layer. A downside to this approach is that each layer (or module, as multiple modules can…

Machine Learning · Computer Science 2020-10-19 Alex Lamb , Anirudh Goyal , Agnieszka Słowik , Michael Mozer , Philippe Beaudoin , Yoshua Bengio

Molecular communication (MC) can enable the transfer of information between nanomachines using molecules as the information carrier. In MC systems, multiple receiver nanomachines often co-exist in the same communication channel to serve…

Information Theory · Computer Science 2022-12-07 Nithin V. Sabu , Abhishek K. Gupta , Neeraj Varshney , Anshuman Jindal

Distribution systems hold a very significant position in the power system since it is the main point of link between bulk power and consumers. A planned and effective distribution network is the key to cope up with the ever increasing…

Other Computer Science · Computer Science 2014-03-20 Ritu Parasher

This paper investigates downlink radio resource management (RRM) in millimeter-wave systems with codebook-based hybrid beamforming in a single cell. We consider a practical but often overlooked multi-channel scenario where the base station…

Networking and Internet Architecture · Computer Science 2024-10-28 Yuan Quan , Shahram Shahsavari , Catherine Rosenberg

Information flows by routes inside the network via mechanisms implemented in the model. These routes can be represented as graphs where nodes correspond to token representations and edges to operations inside the network. We automatically…

Computation and Language · Computer Science 2024-04-18 Javier Ferrando , Elena Voita

The particle-flow (PF) algorithm provides a global event description by reconstructing final-state particles and is central to event reconstruction in CMS. Recently, end-to-end machine learning (ML) approaches have been proposed to directly…

High Energy Physics - Experiment · Physics 2025-08-29 Farouk Mokhtar

Iterative generative models such as Flow Matching and Diffusion models have demonstrated strong test-time scaling behavior, where additional inference computation can improve generation quality. In contrast, Drift Models offer efficient…

Machine Learning · Computer Science 2026-05-19 Chenrui Ma , Xi Xiao , Lin Zhao , Tianyang Wang , Ferdinando Fioretto , Yanning Shen

Summary: Linear mixed models are a commonly used statistical approach in genome-wide association studies when population structure is present. However, naive permutations to empirically estimate the null distribution of a statistic of…

Genomics · Quantitative Biology 2024-10-03 Saul Pierotti , Tomas Fitzgerald , Ewan Birney

Recurrent neural networks (RNNs) have led to breakthroughs in natural language processing and speech recognition, wherein hundreds of millions of people use such tools on a daily basis through smartphones, email servers and other avenues.…

Disordered Systems and Neural Networks · Physics 2020-12-02 Sun-Ting Tsai , En-Jui Kuo , Pratyush Tiwary

Understanding how networks of neurons process information is one of the key challenges in modern neuroscience. A necessary step to achieve this goal is to be able to observe the dynamics of large populations of neurons over a large area of…

Image and Video Processing · Electrical Eng. & Systems 2022-03-09 Pingfan Song , Herman Verinaz Jadan , Carmel L. Howe , Amanda J. Foust , Pier Luigi Dragotti

The analysis of biological networks is characterized by the definition of precise linear constraints used to cumulatively reduce the solution space of the computed states of a multi-omic (for instance metabolic, transcriptomic and…

Molecular Networks · Quantitative Biology 2018-10-15 Vandan Parmar , Pietro Lio

Multiplex networks describe a large variety of complex systems including infrastructures, transportation networks and biological systems. Most of these networks feature a significant link overlap. It is therefore of particular importance to…

Physics and Society · Physics 2016-09-07 Davide Cellai , Sergey N. Dorogovtsev , Ginestra Bianconi

We consider multiple transmitters aiming to communicate their source signals (e.g., images) over a multiple access channel (MAC). Conventional communication systems minimize interference by orthogonally allocating resources (time and/or…

Networking and Internet Architecture · Computer Science 2025-04-08 Selim F. Yilmaz , Can Karamanli , Deniz Gunduz

The growing significance of RNA engineering in diverse biological applications has spurred interest in developing AI methods for structure-based RNA design. While diffusion models have excelled in protein design, adapting them for RNA…

Biomolecules · Quantitative Biology 2024-06-11 Divya Nori , Wengong Jin
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