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Related papers: nanopub-java: A Java Library for Nanopublications

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Nanopublications are a Linked Data format for scholarly data publishing that has received considerable uptake in the last few years. In contrast to the common Linked Data publishing practice, nanopublications work at the granular level of…

Nanopublications are a concept to represent Linked Data in a granular and provenance-aware manner, which has been successfully applied to a number of scientific datasets. We demonstrated in previous work how we can establish reliable and…

Digital Libraries · Computer Science 2017-08-31 Tobias Kuhn , Egon Willighagen , Chris Evelo , Núria Queralt-Rosinach , Emilio Centeno , Laura I. Furlong

With the rapidly increasing amount of scientific literature,it is getting continuously more difficult for researchers in different disciplines to be updated with the recent findings in their field of study.Processing scientific articles in…

Digital Libraries · Computer Science 2022-03-04 Cristina-Iulia Bucur , Tobias Kuhn , Davide Ceolin , Jacco van Ossenbruggen

Making available and archiving scientific results is for the most part still considered the task of classical publishing companies, despite the fact that classical forms of publishing centered around printed narrative articles no longer…

Digital Libraries · Computer Science 2015-07-23 Tobias Kuhn , Christine Chichester , Michael Krauthammer , Michel Dumontier

Scientific publishing is the means by which we communicate and share scientific knowledge, but this process currently often lacks transparency and machine-interpretable representations. Scientific articles are published in long…

Digital Libraries · Computer Science 2020-06-12 Cristina-Iulia Bucur , Tobias Kuhn , Davide Ceolin

The rapid and widespread adoption of Java has created a demand for reliable and reusable mathematical software components to support the growing number of compute-intensive applications now under development, particularly in science and…

Mathematical Software · Computer Science 2007-05-23 Ronald F. Boisvert , Jack J. Dongarra , Roldan Pozo , Karin Remington , G. W. Stewart

Annotations have been formally introduced into Java since Java 5. Since then, annotations have been widely used by the Java community for different purposes, such as compiler guidance and runtime processing. Despite the ever-growing use,…

Software Engineering · Computer Science 2019-04-16 Zhongxing Yu , Chenggang Bai , Lionel Seinturier , Martin Monperrus

In this paper, we present an approach for extending the existing concept of nanopublications --- tiny entities of scientific results in RDF representation --- to broaden their application range. The proposed extension uses English sentences…

Digital Libraries · Computer Science 2013-08-13 Tobias Kuhn , Paolo Emilio Barbano , Mate Levente Nagy , Michael Krauthammer

While the publication of datasets in scientific repositories has become broadly recognised, the repositories tend to have increasing semantic-related problems. For instance, they present various data reuse obstacles for machine-actionable…

Databases · Computer Science 2021-11-19 Matheus Feijoó , Rodrigo Jardim , Sergio Serra , Maria Luiza Campos

While there exist a plethora of deep learning tools and frameworks, the fast-growing complexity of the field brings new demands and challenges, such as more flexible network design, speedy computation on distributed setting, and…

One of the most important tasks in scientific publishing is the articles' evaluation via the editorial board and the reviewers' community. Additionally, in scientific publishing great concern exists regarding the peer-review process and how…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-30 Alexandros Gazis , Giorgos Anagnostakis , Stavros Kourmpetis , Eleftheria Katsiri

At this time, developers of research information systems are experimenting with new tools for research outputs usage that can expand the open access to research. These tools allow researchers to record research as annotations,…

Digital Libraries · Computer Science 2016-08-22 Sergey Parinov , Victoria Antonova

This paper describes a new modelling language for the effective design of Java annotations. Since their inclusion in the 5th edition of Java, annotations have grown from a useful tool for the addition of meta-data to play a central role in…

Programming Languages · Computer Science 2019-10-02 Irene Córdoba , Juan de Lara

Third-party libraries are a central building block to develop software systems. However, outdated third-party libraries are commonly used, and developers are usually less aware of the potential risks. Therefore, a quantitative and holistic…

Software Engineering · Computer Science 2020-02-26 Ying Wang , Bihuan Chen , Kaifeng Huang , Bowen Shi , Congying Xu , Xin Peng , Yang Liu , Yijian Wu

How many times have you tried to re-implement a past CAV tool paper, and failed? Reliably reproducing published scientific discoveries has been acknowledged as a barrier to scientific progress for some time but there remains only a small…

Logic in Computer Science · Computer Science 2015-02-10 Tom Crick , Benjamin A. Hall , Samin Ishtiaq

Managing and growing a successful cyberinfrastructure such as nanoHUB.org presents a variety of opportunities and challenges, particularly in regard to software. This position paper details a number of those issues and how we have…

Software Engineering · Computer Science 2013-09-12 Lynn Zentner , Michael Zentner , Victoria Farnsworth , Michael McLennan , Krishna Madhavan , Gerhard Klimeck

We propose an academic publishing system where research papers are stored in a network of data centres owned by university libraries and research institutions, and are interfaced with the academic community through a website. In our system,…

Academic publications of latest research results are crucial to advance the development of all disciplines. However, there are several severe disadvantages in current academic publication systems. The first is the misconduct during the…

Cryptography and Security · Computer Science 2021-02-18 Yan Zhou , Zhiguo Wan , Zhangshuang Guan

In a world demanding the best performance from financial investments, distributed applications occupy the first place among the proposed solutions. This particularity is due to their distributed architecture which is able to acheives high…

Distributed, Parallel, and Cluster Computing · Computer Science 2009-04-28 Husam Alustwani , Jacques M. Bahi , Ahmed Mostefaoui , Michel Salomon

Libraries of formal proofs are an important part of our mathematical heritage, but their usability and sustainability is poor. Indeed, each library is specific to a proof system, sometimes even to some version of this system. Thus, a…

Logic in Computer Science · Computer Science 2023-05-02 Gilles Dowek , François Thiré
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