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Microscopy images obtained from multiple camera lenses or sensors in biological experiments provide a comprehensive understanding of objects from diverse perspectives. However, using multiple microscope setups increases the risk of…

Image and Video Processing · Electrical Eng. & Systems 2024-07-18 Ruixiong Wang , Stephen Cross , Alin Achim

Dense vertex-to-vertex correspondence between 3D faces is a fundamental and challenging issue for 3D&2D face analysis. While the sparse landmarks have anatomically ground-truth correspondence, the dense vertex correspondences on most facial…

Computer Vision and Pattern Recognition · Computer Science 2021-09-24 Zhenfeng Fan , Silong Peng , Shihong Xia

Numerous regularization methods for deformable image registration aim at enforcing smooth transformations, but are difficult to tune-in a priori and lack a clear physical basis. Physically inspired strategies have emerged, offering a sound…

Image and Video Processing · Electrical Eng. & Systems 2023-12-27 Pablo Alvarez , Stéphane Cotin

Accurate tracking of an anatomical landmark over time has been of high interests for disease assessment such as minimally invasive surgery and tumor radiation therapy. Ultrasound imaging is a promising modality benefiting from low-cost and…

Computer Vision and Pattern Recognition · Computer Science 2023-02-01 Zhihua Liu , Bin Yang , Yan Shen , Xuejun Ni , Huiyu Zhou

The diffeomorphic registration framework enables to define an optimal matching function between two probability measures with respect to a data-fidelity loss function. The non convexity of the optimization problem renders the choice of this…

Statistics Theory · Mathematics 2022-11-24 Lucas de Lara , Alberto González-Sanz , Jean-Michel Loubes

In image registration, a proper transformation should be topology preserving. Especially for landmark-based image registration, if the displacement of one landmark is larger enough than those of neighbourhood landmarks, topology violation…

Numerical Analysis · Mathematics 2014-10-14 R. Cavoretto , A. De Rossi , H. Qiao , B. Quatember , W. Recheis , M. Mayr

Radiological imaging of prostate is becoming more popular among researchers and clinicians in searching for diseases, primarily cancer. Scans might be acquired at different times, with patient movement between scans, or with different…

Computer Vision and Pattern Recognition · Computer Science 2013-11-05 Xin Zhao , Arie Kaufman

Medical ultrasound provides images which are the spatial map of the tissue echogenicity. Unfortunately, an ultrasound image is a low-quality version of the expected Tissue Reflectivity Function (TRF) mainly due to the non-ideal Point Spread…

Image and Video Processing · Electrical Eng. & Systems 2021-09-28 Sobhan Goudarzi , Hassan Rivaz

Multimodal image registration is a challenging but essential step for numerous image-guided procedures. Most registration algorithms rely on the computation of complex, frequently non-differentiable similarity metrics to deal with the…

Computer Vision and Pattern Recognition · Computer Science 2023-07-20 Matteo Ronchetti , Wolfgang Wein , Nassir Navab , Oliver Zettinig , Raphael Prevost

Metamorphosis is a method for diffeomorphic matching of shapes, with many potential applications for anatomical shape comparison in medical imagery, a problem which is central to the field of computational anatomy. An important tool for the…

Optimization and Control · Mathematics 2014-09-24 Casey L Richardson , Laurent Younes

Cardiac T1 mapping can evaluate various clinical symptoms of myocardial tissue. However, there is currently a lack of effective, robust, and efficient methods for motion correction in cardiac T1 mapping. In this paper, we propose a deep…

Computer Vision and Pattern Recognition · Computer Science 2024-10-16 Chiyi Huang , Longwei Sun , Dong Liang , Haifeng Liang , Hongwu Zeng , Yanjie Zhu

Recent years have witnessed rapid advancements in 3D scanning technologies, with applications spanning VR/AR, digital human creation, and medical imaging. Structured-light scanning with phase-shifting techniques is preferred for its use of…

Computer Vision and Pattern Recognition · Computer Science 2025-11-25 Xiang Gao , Xinmu Wang , Zhou Zhao , Junqi Huang , Xianfeng David Gu

Intensity-based image registration approaches rely on similarity measures to guide the search for geometric correspondences with high affinity between images. The properties of the used measure are vital for the robustness and accuracy of…

Computer Vision and Pattern Recognition · Computer Science 2019-02-22 Johan Öfverstedt , Joakim Lindblad , Nataša Sladoje

Pre-trained vision foundation models (VFMs) provide strong semantic representations, yet their patch-level features are inherently coarse, limiting their effectiveness on tasks requiring fine-grained localization, dense prediction, and…

Computer Vision and Pattern Recognition · Computer Science 2026-05-21 Wentong Li , Zhiyuan Qi , Zichen Zhao , Kai Zhang , Lei Zhang

In this work, we focus on the task of learning and representing dense correspondences in deformable object categories. While this problem has been considered before, solutions so far have been rather ad-hoc for specific object types (i.e.,…

Computer Vision and Pattern Recognition · Computer Science 2020-11-26 Natalia Neverova , David Novotny , Vasil Khalidov , Marc Szafraniec , Patrick Labatut , Andrea Vedaldi

CLARITY is a method for converting biological tissues into translucent and porous hydrogel-tissue hybrids. This facilitates interrogation with light sheet microscopy and penetration of molecular probes while avoiding physical slicing. In…

Computer Vision and Pattern Recognition · Computer Science 2017-08-14 Kwame S. Kutten , Nicolas Charon , Michael I. Miller , J. T. Ratnanather , Jordan Matelsky , Alexander D. Baden , Kunal Lillaney , Karl Deisseroth , Li Ye , Joshua T. Vogelstein

Estimating accurate high-dimensional transformations remains very challenging, especially in a clinical setting. In this paper, we introduce a multiscale parameterization of deformations to enhance registration and atlas estimation in the…

Optimization and Control · Mathematics 2025-01-31 Fleur Gaudfernau , Eléonore Blondiaux , Stéphanie Allassonnière , Erwan Le Pennec

Effective learning of asymmetric and local features in images and other data observed on multi-dimensional grids is a challenging objective critical for a wide range of image processing applications involving biomedical and natural images.…

Methodology · Statistics 2022-10-06 Meng Li , Li Ma

Pathologists need to combine information from differently stained pathology slices for accurate diagnosis. Deformable image registration is a necessary technique for fusing multi-modal pathology slices. This paper proposes a hybrid deep…

Image and Video Processing · Electrical Eng. & Systems 2024-10-28 Chulong Zhang , Yuming Jiang , Na Li , Zhicheng Zhang , Md Tauhidul Islam , Jingjing Dai , Lin Liu , Wenfeng He , Wenjian Qin , Jing Xiong , Yaoqin Xie , Xiaokun Liang

Many naturally-occuring models in the sciences are well-approximated by simplified models, using multiscale techniques. In such settings it is natural to ask about the relationship between inverse problems defined by the original problem…

Numerical Analysis · Mathematics 2019-02-28 Kit Newton , Qin Li , Andrew Stuart
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