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Accurate and automatic segmentation of three-dimensional (3D) individual teeth from cone-beam computerized tomography (CBCT) images is a challenging problem because of the difficulty in separating an individual tooth from adjacent teeth and…

Computer Vision and Pattern Recognition · Computer Science 2021-12-06 Tae Jun Jang , Kang Cheol Kim , Hyun Cheol Cho , Jin Keun Seo

Optical Coherence Tomography (OCT) is one of the most important retinal imaging technique. However, involuntary motion artifacts still pose a major challenge in OCT imaging that compromises the quality of downstream analysis, such as…

Image and Video Processing · Electrical Eng. & Systems 2023-05-31 Yiqian Wang , Alexandra Warter , Melina Cavichini , Varsha Alex , Dirk-Uwe G. Bartsch , William R. Freeman , Truong Q. Nguyen , Cheolhong An

3D volume segmentation is a fundamental task in many scientific and medical applications. Producing accurate segmentations efficiently is challenging, in part due to low imaging data quality (e.g., noise and low image resolution) and…

Human-Computer Interaction · Computer Science 2020-04-08 Anahita Sanandaji , Cindy Grimm , Ruth West , Max Parola , Meghan Kajihara , Kathryn Hays , Luke Hillard , Brandon Lane , Molly Beyer

Optical coherence tomography (OCT) is a non-invasive volumetric imaging modality with high spatial and temporal resolution. For imaging larger tissue structures, OCT probes need to be moved to scan the respective area. For handheld…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 Suresh Guttikonda , Maximilian Neidhardt , Vidas Raudonis , Alexander Schlaefer

Optical Coherence Tomography (OCT) is an emerging medical imaging modality for luminal organ diagnosis. The non-constant rotation speed of optical components in the OCT catheter tip causes rotational distortion in OCT volumetric scanning.…

Objective: To achieve accurate 3-D reconstruction and quantitative analysis of human retinal vasculature from a single optical coherence tomography angiography (OCTA) scan. Methods: We introduce Freqformer, a novel Transformer-based model…

Image and Video Processing · Electrical Eng. & Systems 2025-09-30 Lingyun Wang , Bingjie Wang , Jay Chhablani , Jose Alain Sahel , Shaohua Pi

The choroid provides oxygen and nourishment to the outer retina thus is related to the pathology of various ocular diseases. Optical coherence tomography (OCT) is advantageous in visualizing and quantifying the choroid in vivo. (1) The…

Image and Video Processing · Electrical Eng. & Systems 2020-09-09 Huihong Zhang , Jianlong Yang , Kang Zhou , Fei Li , Yan Hu , Yitian Zhao , Ce Zheng , Xiulan Zhang , Jiang Liu

This paper presents the first study to apply tunable wavelet units (UwUs) for 3D retinal layer segmentation from Optical Coherence Tomography (OCT) volumes. To overcome the limitations of conventional max-pooling, we integrate three…

Computer Vision and Pattern Recognition · Computer Science 2025-07-23 An D. Le , Hung Nguyen , Melanie Tran , Jesse Most , Dirk-Uwe G. Bartsch , William R Freeman , Shyamanga Borooah , Truong Q. Nguyen , Cheolhong An

Optical Coherence Tomography (OCT) is a novel and effective screening tool for ophthalmic examination. Since collecting OCT images is relatively more expensive than fundus photographs, existing methods use multi-modal learning to complement…

Image and Video Processing · Electrical Eng. & Systems 2023-08-02 Lehan Wang , Weihang Dai , Mei Jin , Chubin Ou , Xiaomeng Li

Optical coherence tomography (OCT) and confocal microscopy are pivotal in retinal imaging, offering distinct advantages and limitations. In vivo OCT offers rapid, non-invasive imaging but can suffer from clarity issues and motion artifacts,…

Image and Video Processing · Electrical Eng. & Systems 2024-12-18 Xin Tian , Nantheera Anantrasirichai , Lindsay Nicholson , Alin Achim

Optical coherence tomography (OCT) enables high-resolution and non-invasive 3D imaging of the human retina but is inherently impaired by speckle noise. This paper introduces a spatio-temporal denoising algorithm for OCT data on a B-scan…

Computer Vision and Pattern Recognition · Computer Science 2017-03-09 Franziska Schirrmacher , Thomas Köhler , Lennart Husvogt , James G. Fujimoto , Joachim Hornegger , Andreas K. Maier

Purpose: (1) To develop a deep learning algorithm to identify major tissue structures of the optic nerve head (ONH) in 3D optical coherence tomography (OCT) scans; (2) to exploit such information to robustly differentiate among healthy,…

Optical coherence tomography (OCT) and scanning laser ophthalmoscopy (SLO) of the eye has become essential to ophthalmology and the emerging field of oculomics, thus requiring a need for transparent, reproducible, and rapid analysis of this…

Bruch's membrane (BM) segmentation on optical coherence tomography (OCT) is a pivotal step for the diagnosis and follow-up of age-related macular degeneration (AMD), one of the leading causes of blindness in the developed world. Automated…

Image and Video Processing · Electrical Eng. & Systems 2022-11-01 Botond Fazekas , Dmitrii Lachinov , Guilherme Aresta , Julia Mai , Ursula Schmidt-Erfurth , Hrvoje Bogunovic

Optic disk segmentation is a prerequisite step in automatic retinal screening systems. In this paper, we propose an algorithm for optic disk segmentation based on a local adaptive thresholding method. Location of the optic disk is validated…

Computer Vision and Pattern Recognition · Computer Science 2017-10-17 Farnoosh Ghadiri , Robert Bergevin , Masoud Shafiee

For 3D medical image (e.g. CT and MRI) segmentation, the difficulty of segmenting each slice in a clinical case varies greatly. Previous research on volumetric medical image segmentation in a slice-by-slice manner conventionally use the…

Image and Video Processing · Electrical Eng. & Systems 2022-07-12 Wenxuan Wang , Chen Chen , Jing Wang , Sen Zha , Yan Zhang , Jiangyun Li

Optical coherence tomography (OCT) can perform non-invasive high-resolution three-dimensional (3D) imaging and has been widely used in biomedical fields, while it is inevitably affected by coherence speckle noise which degrades OCT imaging…

Optics · Physics 2025-06-30 Renxiong Wu , Fei Zheng , Meixuan Li , Shaoyan Huang , Xin Ge , Linbo Liu , Yong Liu , Guangming Ni

Segmentation of blood vessels in murine cerebral 3D OCTA images is foundational for in vivo quantitative analysis of the effects of neurovascular disorders, such as stroke or Alzheimer's, on the vascular network. However, to accurately…

Image and Video Processing · Electrical Eng. & Systems 2024-03-13 Bastian Wittmann , Lukas Glandorf , Johannes C. Paetzold , Tamaz Amiranashvili , Thomas Wälchli , Daniel Razansky , Bjoern Menze

High anisotropy in volumetric medical images can lead to the inconsistent quantification of anatomical and pathological structures. Particularly in optical coherence tomography (OCT), slice spacing can substantially vary across and within…

Image and Video Processing · Electrical Eng. & Systems 2024-10-15 Coen de Vente , Mohammad Mohaiminul Islam , Philippe Valmaggia , Carel Hoyng , Adnan Tufail , Clara I. Sánchez

3D tooth segmentation is a prerequisite for computer-aided dental diagnosis and treatment. However, segmenting all tooth regions manually is subjective and time-consuming. Recently, deep learning-based segmentation methods produce…

Computer Vision and Pattern Recognition · Computer Science 2022-06-20 Weiwei Cui , Yaqi Wang , Qianni Zhang , Huiyu Zhou , Dan Song , Xingyong Zuo , Gangyong Jia , Liaoyuan Zeng
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