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Choosing a shrinkage method can be done by selecting a penalty from a list of pre-specified penalties or by constructing a penalty based on the data. If a list of penalties for a class of linear models is given, we provide comparisons based…

Methodology · Statistics 2022-01-10 Dean Dustin , Bertrand Clarke , Jennifer Clarke

How to automatically design better machine learning programs is an open problem within AutoML. While evolution has been a popular tool to search for better ML programs, using learning itself to guide the search has been less successful and…

Machine Learning · Computer Science 2024-02-09 John D. Co-Reyes , Yingjie Miao , George Tucker , Aleksandra Faust , Esteban Real

When using machine learning for imbalanced binary classification problems, it is common to subsample the majority class to create a (more) balanced training dataset. This biases the model's predictions because the model learns from data…

Machine Learning · Computer Science 2025-11-03 Nathan Phelps , Daniel J. Lizotte , Douglas G. Woolford

Deep learning has excelled in image recognition tasks through neural networks inspired by the human brain. However, the necessity for large models to improve prediction accuracy introduces significant computational demands and extended…

Computer Vision and Pattern Recognition · Computer Science 2024-08-27 Taigo Sakai , Kazuhiro Hotta

Recommender systems support decisions in various domains ranging from simple items such as books and movies to more complex items such as financial services, telecommunication equipment, and software systems. In this context,…

Information Retrieval · Computer Science 2021-02-15 Alexander Felfernig , Viet-Man Le , Andrei Popescu , Mathias Uta , Thi Ngoc Trang Tran , Müslüum Atas

Deep neural networks are behind many of the recent successes in machine learning applications. However, these models can produce overconfident decisions while encountering out-of-distribution (OOD) examples or making a wrong prediction.…

Machine Learning · Computer Science 2021-06-24 Navid Kardan , Ankit Sharma , Kenneth O. Stanley

Deep learning has yielded extraordinary results in vision and natural language processing, but this achievement comes at a cost. Most models require enormous resources during training, both in terms of computation and in human labeling…

Computer Vision and Pattern Recognition · Computer Science 2021-10-11 Srikumar Ramalingam , Daniel Glasner , Kaushal Patel , Raviteja Vemulapalli , Sadeep Jayasumana , Sanjiv Kumar

Recently supervised machine learning has been ascending in providing new predictive approaches for chemical, biological and materials sciences applications. In this Perspective we focus on the interplay of machine learning algorithm with…

Discovery of diagnostic and prognostic molecular markers is important and actively pursued the research field in cancer research. For complex diseases, this process is often performed using Machine Learning. The current study compares two…

Genomics · Quantitative Biology 2020-04-30 Aneta Polewko-Klim , Witold R. Rudnicki

Image-based machine learning models can be used to make the sorting and grading of agricultural products more efficient. In many regions, implementing such systems can be difficult due to the lack of centralization and automation of…

Computer Vision and Pattern Recognition · Computer Science 2023-01-11 Manuel Knott , Fernando Perez-Cruz , Thijs Defraeye

The analysis of the leukemia data from Whitehead/MIT group is a discriminant analysis (also called a supervised learning). Among thousands of genes whose expression levels are measured, not all are needed for discriminant analysis: a gene…

Biological Physics · Physics 2007-05-23 Wentian Li , Yaning Yang

A key task of data science is to identify relevant features linked to certain output variables that are supposed to be modeled or predicted. To obtain a small but meaningful model, it is important to find stochastically independent…

Methodology · Statistics 2021-12-23 Tim Breitenbach , Lauritz Rasbach , Chunguang Liang , Patrick Jahnke

Supervised machine learning models often associate irrelevant nuisance factors with the prediction target, which hurts generalization. We propose a framework for training robust neural networks that induces invariance to nuisances through…

Machine Learning · Computer Science 2019-12-03 Ayush Jaiswal , Rob Brekelmans , Daniel Moyer , Greg Ver Steeg , Wael AbdAlmageed , Premkumar Natarajan

Whole genome prediction of complex phenotypic traits using high-density genotyping arrays has attracted a great deal of attention, as it is relevant to the fields of plant and animal breeding and genetic epidemiology. As the number of…

Machine Learning · Computer Science 2013-10-08 Dan He , Irina Rish , David Haws , Simon Teyssedre , Zivan Karaman , Laxmi Parida

Data of sequential nature arise in many application domains in forms of, e.g. textual data, DNA sequences, and software execution traces. Different research disciplines have developed methods to learn sequence models from such datasets: (i)…

Machine Learning · Statistics 2018-11-02 Niek Tax , Irene Teinemaa , Sebastiaan J. van Zelst

Data-driven science is an emerging paradigm where scientific discoveries depend on the execution of computational AI models against rich, discipline-specific datasets. With modern machine learning frameworks, anyone can develop and execute…

Machine Learning · Computer Science 2022-08-09 Seth Ockerman , John Wu , Christopher Stewart

Neural networks have proven effective at solving difficult problems but designing their architectures can be challenging, even for image classification problems alone. Our goal is to minimize human participation, so we employ evolutionary…

Neural and Evolutionary Computing · Computer Science 2017-06-13 Esteban Real , Sherry Moore , Andrew Selle , Saurabh Saxena , Yutaka Leon Suematsu , Jie Tan , Quoc Le , Alex Kurakin

MicroRNAs (miRNAs) are a class of non-coding RNAs that regulate gene expression. Identification of total number of miRNAs even in completely sequenced organisms is still an open problem. However, researchers have been using techniques that…

Computational Engineering, Finance, and Science · Computer Science 2012-05-24 A. K. Mishra , H. Chandrasekharan

By removing irrelevant and redundant features, feature selection aims to find a good representation of the original features. With the prevalence of unlabeled data, unsupervised feature selection has been proven effective in alleviating the…

Machine Learning · Computer Science 2024-03-25 Ziyuan Lin , Deanna Needell

Ensembling a neural network is a widely recognized approach to enhance model performance, estimate uncertainty, and improve robustness in deep supervised learning. However, deep ensembles often come with high computational costs and memory…