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The constant potential molecular dynamics simulation method proposed by Siepmann and Sprik and reformulated later by Reed (SR-CPM) has been widely employed to investigate the metallic electrolyte/electrode interfaces, especially for…

Chemical Physics · Physics 2022-05-04 Haoyu Li , Peiyao Wang , Jefferson Zhe Liu , Gengping Jiang

Automating the decision of whether a code change requires manual review is vital for maintaining software quality in modern development workflows. However, the emergence of new programming languages and frameworks creates a critical…

Software Engineering · Computer Science 2025-09-08 Yogev Cohen , Dudi Ohayon , Romy Somkin , Yehudit Aperstein , Alexander Apartsin

The scientific code generation package lbmpy supports the automated design and the efficient implementation of lattice Boltzmann methods (LBMs) through metaprogramming. It is based on a new, concise calculus for describing multiple…

Mathematical Software · Computer Science 2023-08-15 Frederik Hennig , Markus Holzer , Ulrich Rüde

For classification and regression on tabular data, the dominance of gradient-boosted decision trees (GBDTs) has recently been challenged by often much slower deep learning methods with extensive hyperparameter tuning. We address this…

Machine Learning · Computer Science 2025-01-16 David Holzmüller , Léo Grinsztajn , Ingo Steinwart

We present Connection-Aware Motif Sequencing (CamS), a graph-to-sequence representation that enables decoder-only Transformers to learn molecular graphs via standard next-token prediction (NTP). For molecular property prediction,…

Machine Learning · Computer Science 2026-01-26 Zhuoyang Jiang , Yaosen Min , Peiran Jin , Lei Chen

We seek to address a core challenge facing current Large Language Models (LLMs). LLMs have demonstrated superior performance in many tasks, yet continue to struggle with reasoning problems on explicit graphs that require multiple steps. To…

Machine Learning · Computer Science 2024-10-31 Alexander K Taylor , Anthony Cuturrufo , Vishal Yathish , Mingyu Derek Ma , Wei Wang

In contrast to their remarkable performance on general knowledge QA, the true abilities of Large Language Models (LLMs) in tasks demanding deep, specialized reasoning, such as in protein biology, have yet to be thoroughly investigated.…

Quantitative Methods · Quantitative Biology 2025-12-30 Dingyi Rong , Zijian Chen , Qi Jia , Kaiwei Zhang , Haotian Lu , Guangtao Zhai , Ning Liu

The widely adopted sequential variant of Non Maximum Suppression (or Greedy-NMS) is a crucial module for object-detection pipelines. Unfortunately, for the region proposal stage of two/multi-stage detectors, NMS is turning out to be a…

Computer Vision and Pattern Recognition · Computer Science 2020-08-24 Rohun Tripathi , Vasu Singla , Mahyar Najibi , Bharat Singh , Abhishek Sharma , Larry Davis

The integration of Large Language Models (LLMs) into wireless networks presents significant potential for automating system design. However, unlike conventional throughput maximization, Covert Communication (CC) requires optimizing…

Networking and Internet Architecture · Computer Science 2026-03-11 Zhaozhi Liu , Jiaxin Chen , Yuanai Xie , Yuna Jiang , Minrui Xu , Xiao Zhang , Pan Lai , Zan Zhou

LLMs can be used in a variety of code related tasks such as translating from one programming language to another, implementing natural language requirements and code summarization. Artifacts generated by state of the art LLM technology are…

Software Engineering · Computer Science 2024-10-29 Eitan Farchi , Shmulik Froimovich , Rami Katan , Orna Raz

Neural architecture search (NAS) traditionally requires significant human expertise or automated trial-and-error to design deep learning models. We present NN-Caption, an LLM-guided neural architecture search pipeline that generates…

Machine Learning · Computer Science 2025-12-18 Krunal Jesani , Dmitry Ignatov , Radu Timofte

Machine learning on graphs has made substantial progress across domains such as molecular property prediction and chip design. Yet benchmarking practices remain fragmented, often relying on narrow, task-specific datasets and inconsistent…

Neural network potentials (NNPs) are crucial for accelerating computational materials science by surrogating density functional theory (DFT) calculations. Improving their accuracy is possible through pre-training and fine-tuning, where an…

Machine Learning · Computer Science 2025-05-29 Yosuke Oyama , Yusuke Majima , Eiji Ohta , Yasufumi Sakai

Recent claims of strong performance by Large Language Models (LLMs) on causal discovery are undermined by a key flaw: many evaluations rely on benchmarks likely included in pretraining corpora. Thus, apparent success suggests that LLM-only…

Precise measurements of the electromagnetic dipole moments of charged leptons are powerful probes of physics beyond the Standard Model of particle physics. It is essential to study avenues for optimizing the measurement strategies for the…

High Energy Physics - Phenomenology · Physics 2024-10-31 Kartik Bhide , Valerie Lang

Evaluating large language models (LLMs) today rests on fixed benchmarks that apply the same set of items to any model, producing ceiling and floor effects that mask capability gaps. We argue that the most informative evaluation signal lies…

Artificial Intelligence · Computer Science 2026-05-27 Haoxiang Wang , Da Yu , Huishuai Zhang

The rapid development and dynamic nature of large language models (LLMs) make it difficult for conventional quantitative benchmarks to accurately assess their capabilities. We propose report cards, which are human-interpretable, natural…

Machine Learning · Computer Science 2024-09-04 Blair Yang , Fuyang Cui , Keiran Paster , Jimmy Ba , Pashootan Vaezipoor , Silviu Pitis , Michael R. Zhang

The usage of Large Language Models (LLMs) for software and test development has continued to increase since LLMs were first introduced, but only recently have the expectations of LLMs become more realistic. Verifying the correctness of code…

Software Engineering · Computer Science 2025-08-20 Zachariah Sollenberger , Rahul Patel , Saieda Ali Zada , Sunita Chandrasekaran

Evaluating the grammatical competence of second language (L2) learners is essential both for providing targeted feedback and for assessing proficiency. To achieve this, we propose a novel framework leveraging the English Grammar Profile…

Computation and Language · Computer Science 2026-03-19 Stefano Bannò , Penny Karanasou , Kate Knill , Mark Gales

Convex analysis is a modern branch of mathematics with many applications. As Large Language Models (LLMs) start to automate research-level math and sciences, it is important for LLMs to demonstrate the ability to understand and reason with…

Artificial Intelligence · Computer Science 2026-02-05 Yepeng Liu , Yu Huang , Yu-Xiang Wang , Yingbin Liang , Yuheng Bu
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