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This PhD thesis contains several contributions to the field of statistical causal modeling. Statistical causal models are statistical models embedded with causal assumptions that allow for the inference and reasoning about the behavior of…

Machine Learning · Statistics 2021-10-05 Martin Emil Jakobsen

Random forests have long been considered as powerful model ensembles in machine learning. By training multiple decision trees, whose diversity is fostered through data and feature subsampling, the resulting random forest can lead to more…

Artificial Intelligence · Computer Science 2021-08-12 Gilles Audemard , Steve Bellart , Louenas Bounia , Frédéric Koriche , Jean-Marie Lagniez , Pierre Marquis

We study the problem of estimating the parameters of a Boolean product distribution in $d$ dimensions, when the samples are truncated by a set $S \subset \{0, 1\}^d$ accessible through a membership oracle. This is the first time that the…

Machine Learning · Computer Science 2026-05-05 Dimitris Fotakis , Alkis Kalavasis , Christos Tzamos

Identifiability of evolutionary tree models has been a recent topic of discussion and some models have been shown to be non-identifiable. A coalescent-based rooted population tree model, originally proposed by Nielsen et al. 1998 [2], has…

Populations and Evolution · Quantitative Biology 2013-04-15 Arindam RoyChoudhury

A Bayesian network is a widely used probabilistic graphical model with applications in knowledge discovery and prediction. Learning a Bayesian network (BN) from data can be cast as an optimization problem using the well-known…

Artificial Intelligence · Computer Science 2020-09-01 Zhenyu A. Liao , Charupriya Sharma , James Cussens , Peter van Beek

As a flexible nonparametric learning tool, the random forests algorithm has been widely applied to various real applications with appealing empirical performance, even in the presence of high-dimensional feature space. Unveiling the…

Statistics Theory · Mathematics 2022-09-27 Chien-Ming Chi , Patrick Vossler , Yingying Fan , Jinchi Lv

The evaluation of a query over a probabilistic database boils down to computing the probability of a suitable Boolean function, the lineage of the query over the database. The method of query compilation approaches the task in two stages:…

Logic in Computer Science · Computer Science 2017-01-18 Simone Bova , Stefan Szeider

Bayesian inference is now a leading technique for reconstructing phylogenetic trees from aligned sequence data. In this short note, we formally show that the maximum posterior tree topology provides a statistically consistent estimate of a…

Populations and Evolution · Quantitative Biology 2013-07-12 Mike Steel

Random forests have proven to be reliable predictive algorithms in many application areas. Not much is known, however, about the statistical properties of random forests. Several authors have established conditions under which their…

Statistics Theory · Mathematics 2016-05-05 Stefan Wager

One of the most studied models of SAT is random SAT. In this model, instances are composed from clauses chosen uniformly randomly and independently of each other. This model may be unsatisfactory in that it fails to describe various…

Data Structures and Algorithms · Computer Science 2022-02-04 Dina Barak-Pelleg , Daniel Berend , J. C. Saunders

Huelsenbeck and Rannala (2004, Systematic Biology 53, 904-913) presented a series of simulations in order to assess the extent to which the bayesian posterior probabilities associated with phylogenetic trees represent the standard…

Populations and Evolution · Quantitative Biology 2010-01-21 David A. Morrison

With advances in sequencing technologies, there are now massive amounts of genomic data from across all life, leading to the possibility that a robust Tree of Life can be constructed. However, "gene tree heterogeneity", which is when…

Populations and Evolution · Quantitative Biology 2018-03-08 Sebastien Roch , Michael Nute , Tandy Warnow

This paper proposes a novel approach for statistical modelling of a continuous random variable $X$ on $[0, 1)$, based on its digit representation $X=.X_1X_2\ldots$. In general, $X$ can be coupled with a latent random variable $N$ so that…

Methodology · Statistics 2025-12-10 Mario Beraha , Jesper Møller

We study the asymptotic behavior of four statistics associated with subtrees of complete graphs: the uniform probability $p_n$ that a random subtree is a spanning tree of $K_n$, the weighted probability $q_n$ (where the probability a…

Combinatorics · Mathematics 2013-08-22 Alex J. Chin , Gary Gordon , Kellie J. MacPhee , Charles Vincent

This paper offers an overview of the mobile Boolean stochastic geometric model which is a time-dependent version of the ordinary Boolean model in a Euclidean space of dimension $d$. The main question asked is that of obtaining the law of…

Probability · Mathematics 2014-07-28 Takis Konstantopoulos

This paper depicts an algorithm for solving the Decision Boolean Satisfiability Problem using the binary numerical properties of a Special Decision Satisfiability Problem, parallel execution, object oriented, and short termination. The two…

Data Structures and Algorithms · Computer Science 2018-04-17 Carlos Barrón-Romero

Generating function equation has been derived for the probability distribution of the number of nodes with $k \ge 0$ outgoing lines in randomly evolving special trees. The stochastic properties of end-nodes (k=0) have been analyzed, and it…

Statistical Mechanics · Physics 2007-05-23 L. Pal

In 1986, Janson showed that the number of edges in the union of $k$ random spanning trees in the complete graph $K_n$ is a shifted Poisson distribution. Using results from the theory of electrical networks, we provide a new proof of this…

Combinatorics · Mathematics 2020-02-17 Austen James , Matthew Larson , Daniel Montealegre , Andrew Salmon

Catalan numbers $C(n)=\frac{1}{n+1}{2n\choose n}$ enumerate binary trees and Dyck paths. The distribution of paths with respect to their number $k$ of factors is given by ballot numbers $B(n,k)=\frac{n-k}{n+k}{n+k\choose n}$. These integers…

Combinatorics · Mathematics 2008-11-03 Jean-Christophe Aval

To model biological systems using networks, it is desirable to allow more than two levels of expression for the nodes and to allow the introduction of parameters. Various modeling and simulation methods addressing these needs using Boolean…

Molecular Networks · Quantitative Biology 2014-04-23 Yi Ming Zou