Related papers: Performance metrics in a hybrid MPI-OpenMP based m…
The paper demonstrates the optimization of the execution environment of a hybrid OpenMP+MPI computational fluid dynamics code (shallow water equation solver) on a cluster enabled with Intel Xeon Phi coprocessors. The discussion includes:…
MiMiC is a framework for performing multiscale simulations in which loosely coupled external programs describe individual subsystems at different resolutions and levels of theory. To make it highly efficient and flexible, we adopt an…
Understanding the complex behavior of molecular systems is fundamental to fields such as physics, materials science, and biology. Molecular dynamics (MD) simulations are crucial tools for studying atomic-level dynamics. This work focuses on…
We modified a MPI-friendly density functional theory (DFT) source code within hybrid parallelization including CUDA. Our objective is to find out how simple conversions within the hybrid parallelization with mid-range GPUs affect DFT code…
Memory system is often the main bottleneck in chipmultiprocessor (CMP) systems in terms of latency, bandwidth and efficiency, and recently additionally facing capacity and power problems in an era of big data. A lot of research works have…
Hybrid MPI+threads programming is gaining prominence as an alternative to the traditional "MPI everywhere'" model to better handle the disproportionate increase in the number of cores compared with other on-node resources. Current…
Asynchronous programming models (APM) are gaining more and more traction, allowing applications to expose the available concurrency to a runtime system tasked with coordinating the execution. While MPI has long provided support for…
This article presents the parallel implementation of the coupled harmonic oscillator. From the analytical solution of the coupled harmonic oscillator, the design parameters are obtained. After that, a numerical integration of the system…
Given an array $\mathcal{A}$ of $n$ elements and a value $2 \leq k \leq n$, a frequent item or $k$-majority element is an element occurring in $\mathcal{A}$ more than $n/k$ times. The $k$-majority problem requires finding all of the…
Significant inter-symbol interference (ISI) challenges the achievement of reliable, high data-rate molecular communication via diffusion. In this paper, a hybrid modulation based on pulse position and concentration is proposed to mitigate…
Asymmetric multicore processors (AMPs) couple high-performance big cores and low-power small cores with the same instruction-set architecture but different features, such as clock frequency or microarchitecture. Previous work has shown that…
In this paper, we detail how two types of distributed coordinator election algorithms can be compared in terms of performance based on an evaluation on the High Performance Computing (HPC) infrastructure. An experimental approach based on…
We describe the design, implementation and performance of the new hybrid parallelization scheme in our Monte Carlo radiative transfer code SKIRT, which has been used extensively for modeling the continuum radiation of dusty astrophysical…
A high-performance gas kinetic solver using multi-level parallelization is developed to enable pore-scale simulations of rarefied flows in porous media. The Boltzmann model equation is solved by the discrete velocity method with an…
The classical-quantum system heterogeneity (different data characteristics, execution paradigms and synchronization mechanism etc.) renders existing distributed communication mechanisms (e.g. MPI, NCCL etc.) inadequate. This bottleneck…
Multicore systems present on-board memory hierarchies and communication networks that influence performance when executing shared memory parallel codes. Characterising this influence is complex, and understanding the effect of particular…
Multitarget tracking in the interference environments suffers from the nonuniform, unknown and time-varying clutter, resulting in dramatic performance deterioration. We address this challenge by proposing a robust multitarget tracking…
We assess the performance of the hybrid Open Accelerator (OpenACC) and Message Passing Interface (MPI) approach for multi-graphics processing units (GPUs) accelerated thermal lattice Boltzmann (LB) simulation. The OpenACC accelerates…
In the exascale computing era, optimizing MPI collective performance in high-performance computing (HPC) applications is critical. Current algorithms face performance degradation due to system call overhead, page faults, or data-copy…
Modern compute nodes in high-performance computing provide a tremendous level of parallelism and processing power. However, as arithmetic performance has been observed to increase at a faster rate relative to memory and network bandwidths,…