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200 papers

Many cytoskeletal systems are now sufficiently well known to permit their precise quantitative modelling. Microtubule and actin filaments are well characterized, and the associated proteins are often known, as well as their abundance and…

Quantitative Methods · Quantitative Biology 2022-05-30 Carlos A. Lugo , Eashan Saikia , Francois Nedelec

Unmanned Aerial Vehicle (UAV) systems are being increasingly used in a broad range of applications requiring extensive communications, either to interconnect the UAVs with each other or with ground resources. Focusing either on the modeling…

Networking and Internet Architecture · Computer Science 2018-08-16 Sabur Baidya , Zoheb Shaikh , Marco Levorato

In mesh-based numerical simulations, sweep is an important computation pattern. During sweeping a mesh, computations on cells are strictly ordered by data dependencies in given directions. Due to such a serial order, parallelizing sweep is…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-28 Jie Yan , Zhang Yang , Aiqing Zhang , Zeyao Mo

In this work, we present a methodology and a corresponding code-base for constructing mock integral field spectrograph (IFS) observations of simulated galaxies in a consistent and reproducible way. Such methods are necessary to improve the…

Pogobots are a new type of open-source/open-hardware robots specifically designed for swarm robotics research. Their cost-effective and modular design, complemented by vibration-based and wheel-based locomotion, fast infrared communication…

Robotics · Computer Science 2025-09-16 Leo Cazenille , Loona Macabre , Nicolas Bredeche

Restricted three-body codes have a proven ability to recreate much of the disturbed morphology of actual interacting galaxies. As more sophisticated n-body models were developed and computer speed increased, restricted three-body codes fell…

Astrophysics of Galaxies · Physics 2016-04-15 John Wallin , Anthony Holincheck , Allen Harvey

Present day computers expend orders of magnitude more computational resources to perform various cognitive and perception related tasks that humans routinely perform everyday. This has recently resulted in a seismic shift in the field of…

Emerging Technologies · Computer Science 2017-12-22 Abhronil Sengupta , Kaushik Roy

We introduce parasweep, a free and open-source utility for facilitating parallel parameter sweeps with computational models. Instead of requiring parameters to be passed by command-line, which can be error-prone and time-consuming,…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-06 Eviatar Bach

ScopeSim is a flexible multipurpose instrument data simulation framework built in Python. It enables both raw and reduced observation data to be simulated for a wide range of telescopes and instruments quickly and efficiently on a personal…

Instrumentation and Methods for Astrophysics · Physics 2021-09-29 Kieran Leschinski , Hugo Buddelmeijer , Oliver Czoske , Miguel Verdugo , Gijs Verdoes-Kleijn , Werner Zeilinger

Modules for Experiments in Stellar Astrophysics (MESA; (Paxton2011, 2013, 2015, 2018, 2019, Jermyn 2023) is a widely used open-source software for modelling stellar evolution. In many studies, the computational grids covers thousands of…

Instrumentation and Methods for Astrophysics · Physics 2025-09-12 D. Tarczay-Nehéz

The paper illustrates an application of the Resampling approach [2] for the estimation of the aircraft circulation plan reliability. Resampling is an intensive computer statistical method, which can be used effectively in the case of small…

Applications · Statistics 2013-05-14 Maxim Fioshin

JASMINE is a Japanese planned space mission that aims to reveal the formation history of our Galaxy and discover habitable exoEarths. For these objectives, the JASMINE satellite performs high-precision astrometric observations of the…

Research attention on natural user interfaces (NUIs) for drone flights are rising. Nevertheless, NUIs are highly diversified, and primarily evaluated by different physical environments leading to hard-to-compare performance between such…

Human-Computer Interaction · Computer Science 2022-08-01 Zheng Li , Yiming Huang , Yui-Pan Yau , Pan Hui , Lik-Hang Lee

We present SimSpin, a new, public, software framework for generating integral field spectroscopy (IFS) data cubes from N-body/hydrodynamical simulations of galaxies, which can be compared directly with observational datasets. SimSpin…

Astrophysics of Galaxies · Physics 2020-05-26 K. E. Harborne , C. Power , A. S. G. Robotham

An open source software package for modelling thermal neutron transport is presented. The code facilitates Monte Carlo-based transport simulations and focuses in the initial release on interactions in both mosaic single crystals as well as…

Computational Physics · Physics 2019-11-06 Xiao-Xiao Cai , Thomas Kittelmann

Written in Python and utilising ParselTongue to interface with the Astronomical Image Processing System (AIPS), the e-MERLIN data reduction pipeline is intended to automate the procedures required in processing and calibrating radio…

Instrumentation and Methods for Astrophysics · Physics 2015-02-18 Megan Argo

An interactive binary star system simulation was developed to be showcased on an educational platform. The main purpose of the project is to provide insight into the orbital mechanics of such star systems with the help of a three-body…

Physics Education · Physics 2022-10-27 Ayse Pelin Dedeler , Canberk Soytekin

This article illustrates the development of a software named GoldEnvSim for simulation of the dispersion of radionuclides in the atmosphere. The software is written in JavaFX programming language to couple the Weather Research and…

Physics and Society · Physics 2020-12-18 Nguyen Hong Ha , Phan Viet Cuong , Le Tuan Anh , Ho Thi Thao , Hoang Huu Duc , Kieu Ngoc Dung

We present a fully modular and scalable software pipeline for processing electron microscope (EM) images of brain slices into 3D visualization of individual neurons and demonstrate an end-to-end segmentation of a large EM volume using a…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-20 Rafael Vescovi , Hanyu Li , Jeffery Kinnison , Murat Keceli , Misha Salim , Narayanan Kasthuri , Thomas D. Uram , Nicola Ferrier

BioNetFit is a software tool designed for solving parameter identification problems that arise in the development of rule-based models. It solves these problems through curve fitting (i.e., nonlinear regression). BioNetFit is compatible…