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Recent advances and achievements of artificial intelligence (AI) as well as deep and graph learning models have established their usefulness in biomedical applications, especially in drug-drug interactions (DDIs). DDIs refer to a change in…

In this article we propose feature graph architectures (FGA), which are deep learning systems employing a structured initialisation and training method based on a feature graph which facilitates improved generalisation performance compared…

Machine Learning · Computer Science 2013-12-17 Richard Davis , Sanjay Chawla , Philip Leong

Existing approaches to solving combinatorial optimization problems on graphs suffer from the need to engineer each problem algorithmically, with practical problems recurring in many instances. The practical side of theoretical computer…

Machine Learning · Computer Science 2020-07-15 Natalia Vesselinova , Rebecca Steinert , Daniel F. Perez-Ramirez , Magnus Boman

Artificial intelligence has made remarkable progress in handling complex tasks, thanks to advances in hardware acceleration and machine learning algorithms. However, to acquire more accurate outcomes and solve more complex issues,…

Machine Learning · Computer Science 2023-09-12 Mohammad Dehghani , Zahra Yazdanparast

The effective representation, processing, analysis, and visualization of large-scale structured data, especially those related to complex domains such as networks and graphs, are one of the key questions in modern machine learning. Graph…

Machine Learning · Computer Science 2020-12-02 Xiaowen Dong , Dorina Thanou , Laura Toni , Michael Bronstein , Pascal Frossard

Graph Neural Networks (GNN) are indispensable in learning from graph-structured data, yet their rising computational costs, especially on massively connected graphs, pose significant challenges in terms of execution performance. To tackle…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-11-05 Aishwarya Sarkar , Sayan Ghosh , Nathan R. Tallent , Ali Jannesari

Recent trends in business and technology (e.g., machine learning, social network analysis) benefit from storing and processing growing amounts of graph-structured data in databases and data science platforms. FPGAs as accelerators for graph…

Databases · Computer Science 2021-02-09 Jonas Dann , Daniel Ritter , Holger Fröning

Graph learning plays a pivotal role and has gained significant attention in various application scenarios, from social network analysis to recommendation systems, for its effectiveness in modeling complex data relations represented by graph…

Machine Learning · Computer Science 2024-03-08 Man Wu , Xin Zheng , Qin Zhang , Xiao Shen , Xiong Luo , Xingquan Zhu , Shirui Pan

Random geometric graphs (RGGs) are commonly used to model networked systems that depend on the underlying spatial embedding. We concern ourselves with the probability distribution of an RGG, which is crucial for studying its random…

Information Theory · Computer Science 2018-01-16 Mihai-Alin Badiu , Justin P. Coon

Graph-related applications have experienced significant growth in academia and industry, driven by the powerful representation capabilities of graph. However, efficiently executing these applications faces various challenges, such as load…

Hardware Architecture · Computer Science 2023-09-15 Zhengyang Lv , Mingyu Yan , Xin Liu , Mengyao Dong , Xiaochun Ye , Dongrui Fan , Ninghui Sun

Graphs are fundamental data structures which concisely capture the relational structure in many important real-world domains, such as knowledge graphs, physical and social interactions, language, and chemistry. Here we introduce a powerful…

Machine Learning · Computer Science 2018-03-12 Yujia Li , Oriol Vinyals , Chris Dyer , Razvan Pascanu , Peter Battaglia

One of the hot topics in machine learning is the field of GNN. The complexity of graph data has imposed significant challenges on existing machine learning algorithms. Recently, many studies on extending deep learning approaches for graph…

Machine Learning · Computer Science 2024-03-22 László Kovács , Ali Jlidi

The performance of distributed averaging depends heavily on the underlying topology. In various fields, including compressed sensing, multi-party computation, and abstract graph theory, graphs may be expected to be free of short cycles,…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-15 Florine W. Dekker , Zekeriya Erkin , Mauro Conti

Graph-based computations are crucial in a wide range of applications, where graphs can scale to trillions of edges. To enable efficient training on such large graphs, mini-batch subgraph sampling is commonly used, which allows training…

Machine Learning · Computer Science 2025-04-04 Yue Jin , Yongchao Liu , Chuntao Hong

Partitioning a graph into blocks of "roughly equal" weight while cutting only few edges is a fundamental problem in computer science with a wide range of applications. In particular, the problem is a building block in applications that…

Data Structures and Algorithms · Computer Science 2021-05-06 Lars Gottesbüren , Tobias Heuer , Peter Sanders , Christian Schulz , Daniel Seemaier

With the rapid advancement of Artificial Intelligence, the Graphics Processing Unit (GPU) has become increasingly essential across a growing number of safety-critical application domains. Applying a GPU is indispensable for parallel…

Operating Systems · Computer Science 2026-02-25 Yuanhai Zhang , Songyang He , Ruizhe Gou , Mingyue Cui , Boyang Li , Shuai Zhao , Kai Huang

Large graphs can be found in a wide array of scientific fields ranging from sociology and biology to scientometrics and computer science. Their analysis is by no means a trivial task due to their sheer size and complex structure. Such…

Social and Information Networks · Computer Science 2017-02-24 Georgios Drakopoulos , Stavros Kontopoulos , Christos Makris , Vasileios Megalooikonomou

We equip dynamic geometry software (DGS) with a user-friendly method that enables massively parallel calculations on the graphics processing unit (GPU). This interplay of DGS and GPU opens up various applications in education and…

Mathematical Software · Computer Science 2018-08-15 Aaron Montag , Jürgen Richter-Gebert

This article provides an original understanding of the behavior of a class of graph-oriented semi-supervised learning algorithms in the limit of large and numerous data. It is demonstrated that the intuition at the root of these methods…

Machine Learning · Computer Science 2017-11-10 Xiaoyi Mai , Romain Couillet

The value of graph-based big data can be unlocked by exploring the topology and metrics of the networks they represent, and the computational approaches to this exploration take on many forms. The use-case of performing global computations…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-13 Miguel E. Coimbra , Alexandre P. Francisco , Luís Veiga
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