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Two-dimensional error-correcting codes, where codewords are represented as $n \times n$ arrays over a $q$-ary alphabet, find important applications in areas such as QR codes, DNA-based storage, and racetrack memories. Among the possible…

Information Theory · Computer Science 2026-02-17 Wenhao Liu , Zhengyi Jiang , Zhongyi Huang , Hanxu Hou

Codes in the Damerau--Levenshtein metric have been extensively studied recently owing to their applications in DNA-based data storage. In particular, Gabrys, Yaakobi, and Milenkovic (2017) designed a length-$n$ code correcting a single…

Information Theory · Computer Science 2023-06-30 Shuche Wang , Van Khu Vu , Vincent Y. F. Tan

Motivated by the sequence reconstruction problem initiated by Levenshtein, reconstruction codes were introduced by Cai \emph{et al}. to combat errors when a fixed number of noisy channels are available. The central problem on this topic is…

Information Theory · Computer Science 2022-07-05 Rongsheng Wu , Xiande Zhang

This paper addresses fundamental challenges in two-dimensional error correction by constructing optimal codes for \emph{criss-cross deletions}. We consider an $ n \times n $ array $\boldsymbol{X}$ over a $ q $-ary alphabet $\Sigma_q := \{0,…

Information Theory · Computer Science 2025-10-23 Yubo Sun , Gennian Ge

In this paper we consider the problem of encoding data into \textit{repeat-free} sequences in which sequences are imposed to contain any $k$-tuple at most once (for predefined $k$). First, the capacity of the repeat-free constraint are…

Information Theory · Computer Science 2021-06-22 Ohad Elishco , Ryan Gabrys , Eitan Yaakobi , Muriel Médard

Permutation codes and multi-permutation codes have been widely considered due to their various applications, especially in flash memory. In this paper, we consider permutation codes and multi-permutation codes against a burst of stable…

Information Theory · Computer Science 2023-03-14 Yubo Sun , Yiwei Zhang , Gennian Ge

Motivated by average-case trace reconstruction and coding for portable DNA-based storage systems, we initiate the study of \emph{coded trace reconstruction}, the design and analysis of high-rate efficiently encodable codes that can be…

Information Theory · Computer Science 2019-09-11 Mahdi Cheraghchi , Ryan Gabrys , Olgica Milenkovic , João Ribeiro

Varshamov-Tenengolts (VT) codes are a class of codes which can correct a single deletion or insertion with a linear-time decoder. This paper addresses the problem of efficient encoding of non-binary VT codes, defined over an alphabet of…

Information Theory · Computer Science 2018-04-30 Mahed Abroshan , Ramji Venkataramanan , Albert Guillen i Fabregas

A new method for constructing minimum-redundancy binary prefix codes is described. Our method does not explicitly build a Huffman tree; instead it uses a property of optimal prefix codes to compute the codeword lengths corresponding to the…

Data Structures and Algorithms · Computer Science 2016-09-30 Ahmed Belal , Amr Elmasry

The study of new error correcting codes has raised attention in the last years, especially because of their use in cryptosystems that are resistant to attacks running on quantum computers. In 2006, while leaving a more in-depth analysis for…

Combinatorics · Mathematics 2020-03-31 Emanuele Bellini , Chiara Marcolla , Nadir Murru

Codes correcting bursts of deletions and localized deletions have garnered significant research interest in recent years. One of the primary objectives is to construct codes with minimal redundancy. Currently, the best known constructions…

Information Theory · Computer Science 2025-07-08 Zuo Ye , Yubo Sun , Gennian Ge

We introduce a general class of codes which includes several well-known classes of deletion/insertion correcting codes as special cases. For example, the Helberg code, the Levenshtein code, the Varshamov--Tenengolts code, and most variants…

Information Theory · Computer Science 2018-12-27 Khodakhast Bibak , Olgica Milenkovic

The coded trace reconstruction problem asks to construct a code $C\subset \{0,1\}^n$ such that any $x\in C$ is recoverable from independent outputs ("traces") of $x$ from a binary deletion channel (BDC). We present binary codes of rate…

Information Theory · Computer Science 2020-09-15 Joshua Brakensiek , Ray Li , Bruce Spang

We improve Levenshtein's upper bound for the cardinality of a code of length four that is capable of correcting single deletions over an alphabet of even size. We also illustrate that the new upper bound is sharp. Furthermore we construct…

Information Theory · Computer Science 2010-03-23 Hyun Kwang Kim , Joon Yop Lee , Dong Yeol Oh

The efficiency of a code is estimated by its redundancy $R$, while the complexity of a code is estimated by its average delay $\bar N$. In this work we construct word-based codes, for which $R \lesssim \bar N^{-5/3}$. Therefore, word-based…

Information Theory · Computer Science 2007-12-04 G. L. Khodak

In this paper, we investigate binary reconstruction codes capable of correcting one deletion and one substitution. We define the \emph{single-deletion single-substitution ball} function $ \mathcal{B} $ as a mapping from a sequence to the…

Information Theory · Computer Science 2025-05-08 Yuling Li , Yubo Sun , Gennian Ge

Batch codes are a useful notion of locality for error correcting codes, originally introduced in the context of distributed storage and cryptography. Many constructions of batch codes have been given, but few lower bound (limitation)…

Information Theory · Computer Science 2021-06-07 Ray Li , Mary Wootters

We construct deletion error-correcting codes in the oblivious model, where errors are adversarial but oblivious to the encoder's randomness. Oblivious errors bridge the gap between the adversarial and random error models, and are motivated…

Information Theory · Computer Science 2025-06-24 Roni Con , Ray Li

An indel refers to a single insertion or deletion, while an edit refers to a single insertion, deletion or substitution. In this paper, we investigate codes that combat either a single indel or a single edit and provide linear-time…

Information Theory · Computer Science 2019-10-16 Kui Cai , Yeow Meng Chee , Ryan Gabrys , Han Mao Kiah , Tuan Thanh Nguyen

We consider codes over fixed alphabets against worst-case symbol deletions. For any fixed $k \ge 2$, we construct a family of codes over alphabet of size $k$ with positive rate, which allow efficient recovery from a worst-case deletion…

Information Theory · Computer Science 2016-03-02 Boris Bukh , Venkatesan Guruswami , Johan Håstad