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Motivation: Structural heterogeneity in single-particle cryo-electron microscopy (cryo-EM) data represents a major challenge for high-resolution structure determination. Unsupervised classification may serve as the first step in the…

Data Analysis, Statistics and Probability · Physics 2017-11-01 Jiayi Wu , Yong-Bei Ma , Charles Congdon , Bevin Brett , Shuobing Chen , Qi Ouyang , Youdong Mao

In the wild, we often encounter collections of sequential data such as electrocardiograms, motion capture, genomes, and natural language, and sequences may be multichannel or symbolic with nonlinear dynamics. We introduce a new method to…

Machine Learning · Computer Science 2024-06-12 Jonathan Y. Zhou , Yao Xie

This paper presents a novel information-theoretic perspective on generalization in machine learning by framing the learning problem within the context of lossy compression and applying finite blocklength analysis. In our approach, the…

Machine Learning · Computer Science 2026-02-05 Kosuke Sugiyama , Masato Uchida

We propose a novel probabilistic dimensionality reduction framework that can naturally integrate the generative model and the locality information of data. Based on this framework, we present a new model, which is able to learn a smooth…

Machine Learning · Statistics 2016-10-18 Li Wang

While neural networks for learning representation of multi-view data have been previously proposed as one of the state-of-the-art multi-view dimension reduction techniques, how to make the representation discriminative with only a small…

Machine Learning · Computer Science 2018-11-13 Vahid Noroozi , Sara Bahaadini , Lei Zheng , Sihong Xie , Weixiang Shao , Philip S. Yu

In this paper, we study linear regression applied to data structured on a manifold. We assume that the data manifold is smooth and is embedded in a Euclidean space, and our objective is to reveal the impact of the data manifold's extrinsic…

Machine Learning · Computer Science 2023-07-25 Liangchen Liu , Juncai He , Richard Tsai

In this paper, we aim at tackling a general but interesting cross-modality feature learning question in remote sensing community --- can a limited amount of highly-discrimin-ative (e.g., hyperspectral) training data improve the performance…

Computer Vision and Pattern Recognition · Computer Science 2019-12-19 Danfeng Hong , Naoto Yokoya , Nan Ge , Jocelyn Chanussot , Xiao Xiang Zhu

We propose a nonlinear manifold learning technique based on deep convolutional autoencoders that is appropriate for model order reduction of physical systems in complex geometries. Convolutional neural networks have proven to be highly…

Computational Physics · Physics 2021-07-19 John Tencer , Kevin Potter

We analyze the performance of a class of manifold-learning algorithms that find their output by minimizing a quadratic form under some normalization constraints. This class consists of Locally Linear Embedding (LLE), Laplacian Eigenmap,…

Machine Learning · Statistics 2008-06-17 Y. Goldberg , A. Zakai , D. Kushnir , Y. Ritov

Recent success in training deep neural networks have prompted active investigation into the features learned on their intermediate layers. Such research is difficult because it requires making sense of non-linear computations performed by…

Machine Learning · Computer Science 2016-03-01 Yixuan Li , Jason Yosinski , Jeff Clune , Hod Lipson , John Hopcroft

This paper presents a novel non-linear model reduction method: Probabilistic Manifold Decomposition (PMD), which provides a powerful framework for constructing non-intrusive reduced-order models (ROMs) by embedding a high-dimensional system…

Numerical Analysis · Mathematics 2026-01-09 Jiaming Guo , Dunhui Xiao

While variational autoencoders have been successful in several tasks, the use of conventional priors are limited in their ability to encode the underlying structure of input data. We introduce an Encoded Prior Sliced Wasserstein AutoEncoder…

Machine Learning · Computer Science 2021-12-14 Sanjukta Krishnagopal , Jacob Bedrossian

We consider the general problem of utilizing both labeled and unlabeled data to improve data representation performance. A new semi-supervised learning framework is proposed by combing manifold regularization and data representation methods…

Machine Learning · Computer Science 2015-02-16 Weiya Ren

Given a small set of labeled data and a large set of unlabeled data, semi-supervised learning (SSL) attempts to leverage the location of the unlabeled datapoints in order to create a better classifier than could be obtained from supervised…

Machine Learning · Computer Science 2022-05-25 Michael C. Burkhart , Kyle Shan

Uniform Manifold Approximation and Projection (UMAP) is a widely used manifold learning technique for dimensionality reduction. This paper studies UMAP, supervised UMAP, and several competing dimensionality reduction methods, including…

Machine Learning · Computer Science 2026-05-04 Guanzhe Zhang , Shanshan Ding , Zhezhen Jin

Contrastive learning, which aims to capture general representation from unlabeled images to initialize the medical analysis models, has been proven effective in alleviating the high demand for expensive annotations. Current methods mainly…

Computer Vision and Pattern Recognition · Computer Science 2022-08-18 Huai Chen , Renzhen Wang , Xiuying Wang , Jieyu Li , Qu Fang , Hui Li , Jianhao Bai , Qing Peng , Deyu Meng , Lisheng Wang

A major challenge in designing efficient statistical supervised learning algorithms is finding representations that perform well not only on available training samples but also on unseen data. While the study of representation learning has…

Machine Learning · Statistics 2024-02-06 Milad Sefidgaran , Abdellatif Zaidi , Piotr Krasnowski

Deep segmentation neural networks require large training datasets with pixel-wise segmentations, which are expensive to obtain in practice. Mixed supervision could mitigate this difficulty, with a small fraction of the data containing…

Computer Vision and Pattern Recognition · Computer Science 2020-12-16 Jose Dolz , Christian Desrosiers , Ismail Ben Ayed

Manifold learning builds on the "manifold hypothesis," which posits that data in high-dimensional datasets are drawn from lower-dimensional manifolds. Current tools generate global embeddings of data, rather than the local maps used to…

Machine Learning · Computer Science 2025-08-28 Serena Hughes , Timothy Hamilton , Tom Kolokotrones , Eric J. Deeds

Unsupervised approaches to learning in neural networks are of substantial interest for furthering artificial intelligence, both because they would enable the training of networks without the need for large numbers of expensive annotations,…

Computer Vision and Pattern Recognition · Computer Science 2019-04-11 Chengxu Zhuang , Alex Lin Zhai , Daniel Yamins