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The solution of sparse symmetric positive definite linear systems is an important computational kernel in large-scale scientific and engineering modeling and simulation. We will solve the linear systems using a direct method, in which a…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-13 M. Ozan Karsavuran , Esmond G. Ng , Barry W. Peyton

We present a fast sparse matrix permutation algorithm tailored to linear systems arising from triangle meshes. Our approach produces nested-dissection-style permutations while significantly reducing permutation runtime overhead. Rather than…

Sparse linear algebra routines are fundamental building blocks of a large variety of scientific applications. Direct solvers, which are methods for solving linear systems via the factorization of matrices into products of triangular…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-02-21 Valentin Le Fèvre , Tetsuzo Usui , Marc Casas

This survey describes a class of methods known as "fast direct solvers". These algorithms address the problem of solving a system of linear equations $\boldsymbol{Ax}=\boldsymbol{b}$ arising from the discretization of either an elliptic PDE…

Numerical Analysis · Mathematics 2025-11-12 Per-Gunnar Martinsson , Michael O'Neil

We consider the solution of large linear systems of equations that arise when two-dimensional singularly perturbed reaction-diffusion equations are discretized. Standard methods for these problems, such as central finite differences, lead…

Numerical Analysis · Mathematics 2015-04-09 Thái Anh Nhan , Niall Madden

In this article, we introduce a fast and memory efficient solver for sparse matrices arising from the finite element discretization of elliptic partial differential equations (PDEs). We use a fast direct (but approximate) multifrontal…

Numerical Analysis · Computer Science 2015-04-23 AmirHossein Aminfar , Eric Darve

In recent years, there has been widespread adoption of machine learning-based approaches to automate the solving of partial differential equations (PDEs). Among these approaches, Gaussian processes (GPs) and kernel methods have garnered…

Numerical Analysis · Mathematics 2024-03-12 Yifan Chen , Houman Owhadi , Florian Schäfer

Systems of linear equations arise at the heart of many scientific and engineering applications. Many of these linear systems are sparse; i.e., most of the elements in the coefficient matrix are zero. Direct methods based on matrix…

Mathematical Software · Computer Science 2016-08-24 Mathias Jacquelin , Yili Zheng , Esmond Ng , Katherine Yelick

Incomplete factorizations have long been popular general-purpose algebraic preconditioners for solving large sparse linear systems of equations. Guaranteeing the factorization is breakdown free while computing a high quality preconditioner…

Numerical Analysis · Mathematics 2025-02-04 Jennifer Scott , Miroslav Tůma

Solving sparse linear systems from discretized PDEs is challenging. Direct solvers have in many cases quadratic complexity (depending on geometry), while iterative solvers require problem dependent preconditioners to be robust and…

Numerical Analysis · Mathematics 2017-03-14 Kai Yang , Hadi Pouransari , Eric Darve

When solving partial differential equations (PDEs) using finite difference or finite element methods, efficient solvers are required for handling large sparse linear systems. In this paper, a recursive sparse LU decomposition for matrices…

Numerical Analysis · Mathematics 2024-08-27 Zhu Xuanru , Lai Jun

We propose a new approximate factorization for solving linear systems with symmetric positive definite sparse matrices. In a nutshell the algorithm is to apply hierarchically block Gaussian elimination and additionally compress the fill-in.…

Numerical Analysis · Mathematics 2018-05-08 Daria A. Sushnikova , Ivan V. Oseledets

We consider the multidimensional space-fractional diffusion equations with spatially varying diffusivity and fractional order. Significant computational challenges are encountered when solving these equations due both to the kernel…

Numerical Analysis · Mathematics 2021-08-31 Hasnaa Alzahrani , George Turkiyyah , Omar Knio , David Keyes

LU and Cholesky matrix factorization algorithms are core subroutines used to solve systems of linear equations (SLEs) encountered while solving an optimization problem. Standard factorization algorithms are highly efficient but remain…

Numerical Analysis · Mathematics 2022-07-25 Adolfo R. Escobedo

The solution of a sparse system of linear equations is ubiquitous in scientific applications. Iterative methods, such as the Preconditioned Conjugate Gradient method (PCG), are normally chosen over direct methods due to memory and…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-03-04 Joshua Dennis Booth , Hongyang Sun , Trevor Garnett

Partial Differential Equations (PDEs) describe several problems relevant to many fields of applied sciences, and their discrete counterparts typically involve the solution of sparse linear systems. In this context, we focus on the analysis…

Numerical Analysis · Mathematics 2022-01-17 Antonella Galizia , Simone Cammarasana , Andrea Clematis , Giuseppe Patane'

A new runtime environment for the execution of recursive matrix algorithms on a supercomputer with distributed memory is proposed. It is designed both for dense and sparse matrices. The environment ensures decentralized control of the…

Symbolic Computation · Computer Science 2023-03-21 Gennadi Malaschonok , Alla Sidko

Cholesky factorization is a widely used method for solving linear systems involving symmetric, positive-definite matrices, and can be an attractive choice in applications where a high degree of numerical stability is needed. One such…

Numerical Analysis · Mathematics 2023-05-09 Felix Liu , Albin Fredriksson , Stefano Markidis

Kernel methods represent some of the most popular machine learning tools for data analysis. Since exact kernel methods can be prohibitively expensive for large problems, reliable low-rank matrix approximations and high-performance…

Numerical Analysis · Mathematics 2018-04-17 Jianwei Xiao , Ming Gu

We introduce the sparsified Cholesky and sparsified multigrid algorithms for solving systems of linear equations. These algorithms accelerate Gaussian elimination by sparsifying the nonzero matrix entries created by the elimination process.…

Data Structures and Algorithms · Computer Science 2015-12-08 Rasmus Kyng , Yin Tat Lee , Richard Peng , Sushant Sachdeva , Daniel A. Spielman
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