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Most of the existing research in assembly pathway prediction/analysis of virus cap- sids makes the simplifying assumption that the configuration of the intermediate states can be extracted directly from the final configuration of the entire…

Quantitative Methods · Quantitative Biology 2016-10-04 Nathan L Clement , Muhibur Rasheed , Chandrajit L Bajaj

This paper investigates a new class of modifier-adaptation schemes to overcome plant-model mismatch in real-time optimization of uncertain processes. The main contribution lies in the integration of concepts from the areas of Bayesian…

Derivative-Free Optimization (DFO) involves methods that rely solely on evaluations of the objective function. One of the earliest strategies for designing DFO methods is to adapt first-order methods by replacing gradients with…

Optimization and Control · Mathematics 2025-02-12 Timothé Taminiau , Estelle Massart , Geovani Nunes Grapiglia

Ab initio simulations are capable of providing detailed information of material behavior at the nanoscale. Simulating experimentally relevant situations is, however, often computationally intense. Using hybrid approaches between ab initio…

Computational Physics · Physics 2019-03-26 Michael Sluydts , Michiel Larmuseau , Johan Lauwaert , Stefaan Cottenier

Derivative-free optimization (DFO) is vital in solving complex optimization problems where only noisy function evaluations are available through an oracle. Within this domain, DFO via finite difference (FD) approximation has emerged as a…

Machine Learning · Computer Science 2025-02-19 Wang Du-Yi , Liang Guo , Liu Guangwu , Zhang Kun

This work addresses inverse linear optimization where the goal is to infer the unknown cost vector of a linear program. Specifically, we consider the data-driven setting in which the available data are noisy observations of optimal…

Optimization and Control · Mathematics 2021-12-07 Rishabh Gupta , Qi Zhang

Locality of compact one-electron orbitals expanded strictly in terms of local subsets of basis functions can be exploited in density functional theory (DFT) to achieve linear growth of computation time with systems size, crucial in…

Computational Physics · Physics 2021-10-01 Yifei Shi , Jessica Karaguesian , Rustam Z. Khaliullin

Diffusion models are capable of generating photo-realistic images that combine elements which likely do not appear together in the training set, demonstrating the ability to \textit{compositionally generalize}. Nonetheless, the precise…

Artificial Intelligence · Computer Science 2024-10-14 Qiyao Liang , Ziming Liu , Mitchell Ostrow , Ila Fiete

We study derivative-free methods for policy optimization over the class of linear policies. We focus on characterizing the convergence rate of these methods when applied to linear-quadratic systems, and study various settings of driving…

Machine Learning · Computer Science 2020-05-19 Dhruv Malik , Ashwin Pananjady , Kush Bhatia , Koulik Khamaru , Peter L. Bartlett , Martin J. Wainwright

We develop an algorithm for minimizing a function using $n$ batched function value measurements at each of $T$ rounds by using classifiers to identify a function's sublevel set. We show that sufficiently accurate classifiers can achieve…

Machine Learning · Statistics 2018-04-12 Tatsunori B. Hashimoto , Steve Yadlowsky , John C. Duchi

The paper discusses derivative-free optimization (DFO), which involves minimizing a function without access to gradients or directional derivatives, only function evaluations. Classical DFO methods, which mimic gradient-based methods, such…

Optimization and Control · Mathematics 2025-04-17 Bumsu Kim , HanQin Cai , Daniel McKenzie , Wotao Yin

We propose and analyze a model-based derivative-free (DFO) algorithm for solving bound-constrained optimization problems where the objective function is the composition of a smooth function and a vector of black-box functions. We assume…

Optimization and Control · Mathematics 2024-01-03 Frank E. Curtis , Shima Dezfulian , Andreas Wächter

3D part assembly aims to understand part relationships and predict their 6-DoF poses to construct realistic 3D shapes, addressing the growing demand for autonomous assembly, which is crucial for robots. Existing methods mainly estimate the…

Computer Vision and Pattern Recognition · Computer Science 2025-05-02 Ruiyuan Zhang , Qi Wang , Jiaxiang Liu , Yu Zhang , Yuchi Huo , Chao Wu

Diffusion models often exhibit inconsistent sample quality due to stochastic variations inherent in their sampling trajectories. Although training-based fine-tuning (e.g. DDPO [1]) and inference-time alignment techniques[2] aim to improve…

Computer Vision and Pattern Recognition · Computer Science 2025-05-30 Sixian Wang , Zhiwei Tang , Tsung-Hui Chang

Although large-scale visual foundation models (VFMs) achieve remarkable performance in semantic understanding, they still underperform in instance-aware dense prediction tasks. They exhibit different biases in representation: for instance,…

Computer Vision and Pattern Recognition · Computer Science 2026-05-19 Yachan Guo , JoseLuis Gomez Zurita , Danna Xue , Yi Xiao , AntonioManuel Lopez Pena

Commonly used linear and nonlinear constitutive material models in deformation simulation contain many simplifications and only cover a tiny part of possible material behavior. In this work we propose a framework for learning customized…

Graphics · Computer Science 2020-10-27 Bin Wang , Yuanmin Deng , Paul Kry , Uri Ascher , Hui Huang , Baoquan Chen

Diffusion models excel at capturing the natural design spaces of images, molecules, DNA, RNA, and protein sequences. However, rather than merely generating designs that are natural, we often aim to optimize downstream reward functions while…

Direct air capture of Carbon Dioxide is a technical solution that does not rely on natural processes to capture CO2 from the atmosphere. In DAC, the filter material is designed to specifically bind CO2 molecules. Hence a high-capacity…

Quantum Physics · Physics 2023-11-22 Gopal Ramesh Dahale

In many areas of science and engineering, discovering the governing differential equations from the noisy experimental data is an essential challenge. It is also a critical step in understanding the physical phenomena and prediction of the…

Methodology · Statistics 2026-05-12 Jiuhai Chen , Lulu Kang , Guang Lin

Inter-image association modeling is crucial for co-salient object detection. Despite satisfactory performance, previous methods still have limitations on sufficient inter-image association modeling. Because most of them focus on image…

Computer Vision and Pattern Recognition · Computer Science 2024-10-11 Long Li , Nian Liu , Dingwen Zhang , Zhongyu Li , Salman Khan , Rao Anwer , Hisham Cholakkal , Junwei Han , Fahad Shahbaz Khan