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Synchrotron processes, the radiative processes associated with the interaction of energetic charged particles with magnetic field, are of interest in many areas in astronomy, from the interstellar medium to extreme environments near compact…

pynucastro is a python library that provides visualization and analyze techniques to classify, construct, and evaluate nuclear reaction rates and networks. It provides tools that allow users to determine the importance of each rate in the…

With the increasing application of deep learning algorithms to time series classification, especially in high-stake scenarios, the relevance of interpreting those algorithms becomes key. Although research in time series interpretability has…

Machine Learning · Computer Science 2022-08-16 Jacqueline Höllig , Cedric Kulbach , Steffen Thoma

We present CONAN (COde for exoplaNet ANalysis), an open-source Python package for comprehensive analyses of exoplanetary systems. It provides a unified Bayesian framework to simultaneously analyze diverse exoplanet datasets to derive global…

Instrumentation and Methods for Astrophysics · Physics 2025-08-29 Babatunde Akinsanmi , Monika Lendl , Andreas Krenn

We present PyTorch Geometric Temporal a deep learning framework combining state-of-the-art machine learning algorithms for neural spatiotemporal signal processing. The main goal of the library is to make temporal geometric deep learning…

Network inference is a major field of interest for the ecological community, especially in light of the high cost and difficulty of manual observation, and easy availability of remote, long term monitoring data. In addition, comparing…

Quantitative Methods · Quantitative Biology 2021-03-30 Anshuman Swain , Travis Byrum , Zhaoyi Zhuang , Luke Perry , Michael Lin , William Fagan

stream-learn is a Python package compatible with scikit-learn and developed for the drifting and imbalanced data stream analysis. Its main component is a stream generator, which allows to produce a synthetic data stream that may incorporate…

Machine Learning · Computer Science 2020-01-31 Paweł Ksieniewicz , Paweł Zyblewski

Over the last two decades, alongside the increased availability of large network datasets, we have witnessed the rapid rise of network science. For many systems, however, the data we have access to is not a direct description of the…

Social and Information Networks · Computer Science 2021-06-02 Stefan McCabe , Leo Torres , Timothy LaRock , Syed Arefinul Haque , Chia-Hung Yang , Harrison Hartle , Brennan Klein

The study of complex many-body systems via analysis of the trajectories of the units that dynamically move and interact within them is a non-trivial task. The workflow for extracting meaningful information from the raw trajectory data is…

Materials Science · Physics 2025-10-31 Simone Martino , Matteo Becchi , Andrew Tarzia , Daniele Rapetti , Giovanni M. Pavan

Network theory provides various tools for investigating the structural or functional topology of many complex systems found in nature, technology and society. Nevertheless, it has recently been realised that a considerable number of systems…

Data Analysis, Statistics and Probability · Physics 2012-03-23 Jonathan F. Donges , Hanna C. H. Schultz , Norbert Marwan , Yong Zou , Juergen Kurths

Leading experts from both communities have suggested the need to (re)connect research in neuroscience and artificial intelligence (AI) to accelerate the development of next-generation AI innovations. They term this convergence as NeuroAI.…

Single molecule F\"orster resonance energy transfer (smFRET) is a powerful experimental technique for studying the properties of individual biological molecules in solution. However, as adoption of smFRET techniques becomes more widespread,…

Computational Engineering, Finance, and Science · Computer Science 2014-12-22 Rebecca R. Murphy , Sophie E. Jackson , David Klenerman

In recent times, quantum reservoir computing has emerged as a potential resource for time series prediction. Hence, there is a need for a flexible framework to test quantum circuits as nonlinear dynamical systems. We have developed a…

Quantum Physics · Physics 2024-01-22 Stanley Miao , Ola Tangen Kulseng , Alexander Stasik , Franz G. Fuchs

Bibliometric analysis is a critical tool for understanding the structure, dynamics, and impact of scientific research. Traditional methods often fall short in capturing the intricate relationships and evolving trends within scientific…

Digital Libraries · Computer Science 2026-01-27 Mirko Lai , Salvatore Vilella , Federica Cena , Giancarlo Ruffo

We present Cyclotron, a framework and compiler for using recurrence equations to express streaming dataflow algorithms, which then get portably compiled to distributed topologies of interlinked processors. Our framework provides an input…

Programming Languages · Computer Science 2025-11-14 Shiv Sundram , Akhilesh Balasingam , Nathan Zhang , Kunle Olukotun , Fredrik Kjolstad

Machine learning has emerged as a powerful tool for time series analysis. Existing methods are usually customized for different analysis tasks and face challenges in tackling practical problems such as partial labeling and domain shift. To…

Machine Learning · Computer Science 2024-08-20 Zhiyu Liang , Chen Liang , Zheng Liang , Hongzhi Wang , Bo Zheng

Evaluating time series attribution methods is difficult because real-world datasets rarely provide ground truth for which time points drive a prediction. A common workaround is to generate synthetic data where class-discriminating features…

Machine Learning · Computer Science 2026-03-10 Gregor Baer

Considering the models that apply the contextual information of time-series data could improve the fault diagnosis performance, some neural network structures such as RNN, LSTM, and GRU were proposed to model the fault diagnosis…

Machine Learning · Computer Science 2022-08-25 Chun Yang

Background: The study of genome-scale metabolic models and their underlying networks is one of the most important fields in systems biology. The complexity of these models and their description makes the use of computational tools an…

Molecular Networks · Quantitative Biology 2012-12-03 D. Gamermann , A. Montagud , R. A. Jaime Infante , J. Triana , P. F. de Córdoba , J. F. Urchueguía

Time series processing and feature extraction are crucial and time-intensive steps in conventional machine learning pipelines. Existing packages are limited in their applicability, as they cannot cope with irregularly-sampled or…

Machine Learning · Computer Science 2021-12-23 Jonas Van Der Donckt , Jeroen Van Der Donckt , Emiel Deprost , Sofie Van Hoecke