Related papers: Simplicial and Cellular Trees
Complex networks are universal, arising in fields as disparate as sociology, physics, and biology. In the past decade, extensive research into the properties and behaviors of complex systems has uncovered surprising commonalities among the…
Motivated by the question of how macromolecules assemble, the notion of an {\it assembly tree} of a graph is introduced. Given a graph $G$, the paper is concerned with enumerating the number of assembly trees of $G$, a problem that applies…
Rapid advance of experimental techniques provides an unprecedented in-depth view into complex developmental processes. Still, little is known on how the complexity of multicellular organisms evolved by elaborating developmental programs and…
We present a version of the weighted cellular matrix-tree theorem that is suitable for calculating explicit generating functions for spanning trees of highly structured families of simplicial and cell complexes. We apply the result to give…
A hypertree, or $\mathbb{Q}$-acyclic complex, is a higher-dimensional analogue of a tree. We study random $2$-dimensional hypertrees according to the determinantal measure suggested by Lyons. We are especially interested in their…
We present a concept called the branch-depth of a connectivity function, that generalizes the tree-depth of graphs. Then we prove two theorems showing that this concept aligns closely with the notions of tree-depth and shrub-depth of graphs…
A tree diagram is a tree with positive integral weight on each edge, which is a notion generalized from the Dynkin diagrams of finite-dimensional simple Lie algebras. We introduce two nilpotent Lie algebras and their extended solvable Lie…
Dynamic graph theory is a novel, growing area that deals with graphs that change over time and is of great utility in modelling modern wireless, mobile and dynamic environments. As a graph evolves, possibly arbitrarily, it is challenging to…
Quasi-trees generalize trees in that the unique "path" between two nodes may be infinite and have any countable order type. They are used to define the rank-width of a countable graph in such a way that it is equal to the least upper-bound…
We investigate the structure of trees that have minimal algebraic connectivity among all trees with a given degree sequence. We show that such trees are caterpillars and that the vertex degrees are non-decreasing on every path on…
The top tree data structure is an important and fundamental tool in dynamic graph algorithms. Top trees have existed for decades, and today serve as an ingredient in many state-of-the-art algorithms for dynamic graphs. In this work, we give…
We consider the problem of testing properties of graphs underlying high-dimensional graphical models. We adopt the model of covariance queries introduced by Lugosi, Truszkowski, Velona, and Zwiernik (2021). We study the case when the…
We prove that every oriented tree on $n$ vertices with bounded maximum degree appears as a spanning subdigraph of every directed graph on $n$ vertices with minimum semidegree at least $n/2+o(n)$. This can be seen as a directed graph…
The connected tree-width of a graph is the minimum width of a tree-decomposition whose parts induce connected subgraphs. Long cycles are examples of graphs that have small tree-width but large connected tree-width. We show that a graph has…
In this expository paper we present some ideas of algebraic topology (more precisely, of homology theory) in a language accessible to non-specialists in the area. A $1$-cycle in a graph is a set $C$ of edges such that every vertex is…
This is a survey article on trees, with a modest number of proofs to give a flavor of the way these topologies can be efficiently handled. Trees are defined in set-theorist fashion as partially ordered sets in which the elements below each…
We develop a notion of a dual of a graph, generalizing the definition of Goulden and Yong (which only applied to trees), and reproving their main result using our new notion. We in fact give three definitions of the dual: a graph-theoretic…
Trees fill many extremal roles in graph theory, being minimally connected and serving a critical role in the definition of $n$-good graphs. In this article, we consider the generalization of trees to the setting of $r$-uniform hypergraphs…
There are several interrelated notions of discrete curvature on graphs. Many approaches utilize the optimal transportation metric on its probability simplex or the distance matrix of the graph. In this survey article, we compute formulas…
In Chapter 1 we fully characterise pairs of finite graphs which form a gap in the full homomorphism order. This leads to a simple proof of the existence of generalised duality pairs. We also discuss how such results can be carried to…