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The use of multigrid and related preconditioners with the finite element method is often limited by the difficulty of applying the algorithm effectively to a problem, especially when the domain has a complex shape or adaptive refinement. We…

Numerical Analysis · Computer Science 2015-03-19 Peter R. Brune , Matthew G. Knepley , L. Ridgway Scott

High-level synthesis (HLS) tools have brought FPGA development into the mainstream, by allowing programmers to design architectures using familiar languages such as C, C++, and OpenCL. While the move to these languages has brought…

Hardware Architecture · Computer Science 2019-10-11 Johannes de Fine Licht , Torsten Hoefler

We describe in this paper new design techniques used in the \cpp exact linear algebra library \linbox, intended to make the library safer and easier to use, while keeping it generic and efficient. First, we review the new simplified…

Mathematical Software · Computer Science 2014-07-14 Brice Boyer , Jean-Guillaume Dumas , Pascal Giorgi , Clément Pernet , B. David Saunders

From FORTRAN to NumPy, tensors have revolutionized how we express computation. However, tensors in these, and almost all prominent systems, can only handle dense rectilinear integer grids. Real world tensors often contain underlying…

Mathematical Software · Computer Science 2025-01-30 Willow Ahrens , Teodoro Fields Collin , Radha Patel , Kyle Deeds , Changwan Hong , Saman Amarasinghe

In this paper, we present a machine learning-based data generator framework tailored to aid researchers who utilize simulations to examine various physical systems or processes. High computational costs and the resulting limited data often…

Machine Learning · Computer Science 2023-05-17 Sabber Ahamed , Md Mesbah Uddin

We present a high-level domain-specific language (DSL) interface to drive an adaptive incomplete $k$-d tree-based framework for finite element (FEM) solutions to PDEs. This DSL provides three key advances: (a) it abstracts out the…

Computational Engineering, Finance, and Science · Computer Science 2023-06-01 Eric Heisler , Cheng-Hau Yang , Aadesh Deshmukh , Baskar Ganapathysubramanian , Hari Sundar

This paper introduces ChemGen, a software package that uses code generation to integrate multispecies thermodynamics and chemical kinetics into C+-based computational physics codes. ChemGen aims to make chemical kinetics more accessible in…

Computational Physics · Physics 2025-12-11 Ryan F. Johnson , Eric J. Ching , Ethan S. Genter , Joshua E. Lipman , Andrew D. Kercher , Jay Arcities , Hai Wang

A computational nanophotonic design library for gradient-based optimization called SPINS is presented. Borrowing the concept of computational graphs, SPINS is a design framework that emphasizes flexibility and reproducible results. The…

Quantum computing is being increasingly adopted for solving classically intractable problems across various domains. However, the availability of accessible and scalable software frameworks remains essential for practical experimentation…

Quantum Physics · Physics 2025-08-19 Param Pathak , K Tarakeshwar , Syed Sufiyan Ali , Shalini Devendrababu , Adarsh Ganesan

Adaptive Computing is an application-agnostic outer loop framework to strategically deploy simulations and experiments to guide decision making for scale-up analysis. Resources are allocated over successive batches, which makes the…

A key hurdle is demonstrating compute resource capability with limited benchmarks. We propose workflow templates as a solution, offering adaptable designs for specific scientific applications. Our paper identifies common usage patterns for…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-31 Gregor von Laszewski , Wesley Brewer , Sean R. Wilkinson , Andrew Shao , J. P. Fleischer , Harshad Pitkar , Christine R. Kirkpatrick , Geoffrey C. Fox

Various fields of science and engineering rely on linear algebra for large scale data analysis, modeling and simulation, machine learning, and other applied problems. Linear algebra computations often dominate the execution time of such…

Mathematical Software · Computer Science 2014-08-07 Boyana Norris , Sa-Lin Bernstein , Ramya Nair , Elizabeth Jessup

Advancements in LLMs have recently unveiled challenges tied to computational efficiency and continual scalability due to their requirements of huge parameters, making the applications and evolution of these models on devices with limited…

Ocean modelling requires the production of high-fidelity computational meshes upon which to solve the equations of motion. The production of such meshes by hand is often infeasible, considering the complexity of the bathymetry and…

Digital Libraries · Computer Science 2015-09-17 Christian T. Jacobs , Alexandros Avdis , Simon L. Mouradian , Matthew D. Piggott

We describe a new C++ library for multiprecision arithmetic for numbers in the order of 100--500 bits, i.e., representable with just a few limbs. The library is written in "optimizing-compiler-friendly" C++, with an emphasis on the use of…

Cryptography and Security · Computer Science 2018-04-20 Niek J. Bouman

This article presents MuMFiM, an open source application for multiscale modeling of fibrous materials on massively parallel computers. MuMFiM uses two scales to represent fibrous materials such as biological network materials (extracellular…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-04 Jacob Merson , Catalin Picu , Mark S. Shephard

This paper delivers a software -- libEMM -- for 3D controlled-source electromagnetics (CSEM) modelling in fictitious wave domain, based on the newly developed high-order finite-difference time-domain (FDTD) method on non-uniform grid. The…

Geophysics · Physics 2023-05-03 Pengliang Yang

The topological transitions that occur to the grain boundary network during grain growth in a material with uniform grain boundary energies are believed to be known. The same is not true for more realistic materials, since more general…

Materials Science · Physics 2021-10-29 Erdem Eren , Jeremy K. Mason

We analyze optimal complexity of adaptive finite element methods (AFEMs) for general second-order linear elliptic partial differential equations (PDEs) in the Lax-Milgram setting. To this end, we formulate an adaptive algorithm which steers…

Numerical Analysis · Mathematics 2026-04-21 Thomas Führer , Paula Hilbert , Ani Miraçi , Dirk Praetorius

deal.II is a state-of-the-art finite element library focused on generality, dimension-independent programming, parallelism, and extensibility. Herein, we outline its primary design considerations and its sophisticated features such as…