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Related papers: moco: Fast Motion Correction for Calcium Imaging

200 papers

Calcium imaging data promises to transform the field of neuroscience by making it possible to record from large populations of neurons simultaneously. However, determining the exact moment in time at which a neuron spikes, from a calcium…

Methodology · Statistics 2018-02-22 Sean Jewell , Toby Dylan Hocking , Paul Fearnhead , Daniela Witten

Motion artifacts in Magnetic Resonance Imaging (MRI) arise due to relatively long acquisition times and can compromise the clinical utility of acquired images. Traditional motion correction methods often fail to address severe motion,…

Image and Video Processing · Electrical Eng. & Systems 2024-07-04 Ziad Al-Haj Hemidi , Christian Weihsbach , Mattias P. Heinrich

Calcium imaging has become a fundamental neural imaging technique, aiming to recover the individual activity of hundreds of neurons in a cortical region. Current methods (mostly matrix factorization) are aimed at detecting neurons in the…

Applications · Statistics 2019-02-11 Gal Mishne , Adam S. Charles

Human motion reconstruction from monocular videos is a fundamental challenge in computer vision, with broad applications in AR/VR, robotics, and digital content creation, but remains challenging under frequent occlusions in real-world…

Computer Vision and Pattern Recognition · Computer Science 2026-01-26 Zhiyin Qian , Siwei Zhang , Bharat Lal Bhatnagar , Federica Bogo , Siyu Tang

Recently, transformer-based approaches have shown promising results for semi-supervised video object segmentation. However, these approaches typically struggle on long videos due to increased GPU memory demands, as they frequently expand…

Computer Vision and Pattern Recognition · Computer Science 2024-09-27 Abdelrahman Shaker , Syed Talal Wasim , Martin Danelljan , Salman Khan , Ming-Hsuan Yang , Fahad Shahbaz Khan

A shape filter is presented to repair segmentation results obtained in calcium imaging of neurons in vivo. This post-segmentation algorithm can automatically smooth the shapes obtained from a preliminary segmentation, while precluding the…

Image and Video Processing · Electrical Eng. & Systems 2018-06-04 Jie Wang , Zhongxiao Fu , Nasrin Sadeghzadehyazdi , Jonathan Kipnis , Scott T. Acton

Motion artifacts are a pervasive problem in MRI, leading to misdiagnosis or mischaracterization in population-level imaging studies. Current retrospective rigid intra-slice motion correction techniques jointly optimize estimates of the…

Image and Video Processing · Electrical Eng. & Systems 2023-11-17 Nalini M. Singh , Neel Dey , Malte Hoffmann , Bruce Fischl , Elfar Adalsteinsson , Robert Frost , Adrian V. Dalca , Polina Golland

Magneto-optical trapping (MOT) is a key technique on the route towards ultracold molecular ensembles. However, the realization and optimization of magneto-optical traps with their wide parameter space is particularly difficult. Here, we…

Atomic Physics · Physics 2021-08-11 S Xu , P Kaebert , M Stepanova , T Poll , M Siercke , S Ospelkaus

Fourier ptychography (FP) is a recently proposed computational imaging technique for high space-bandwidth product imaging. In real setups such as endoscope and transmission electron microscope, the common sample motion largely degrades the…

Recently, several single-pixel imaging (SPI) schemes have emerged for imaging fast-moving objects and have shown dramatic results. However, fast image reconstruction of a moving object with high quality is still challenging for SPI, thereby…

Optics · Physics 2024-10-08 Shijian Li , Xu-Ri Yao , Wei Zhang , Yeliang Wang , Qing Zhao

Given 2D point correspondences between an image pair, inferring the camera motion is a fundamental issue in the computer vision community. The existing works generally set out from the epipolar constraint and estimate the essential matrix,…

Computer Vision and Pattern Recognition · Computer Science 2025-08-21 Guangyang Zeng , Qingcheng Zeng , Xinghan Li , Biqiang Mu , Jiming Chen , Ling Shi , Junfeng Wu

A new Bayesian state and parameter learning algorithm for multiple target tracking (MTT) models with image observations is proposed. Specifically, a Markov chain Monte Carlo algorithm is designed to sample from the posterior distribution of…

Applications · Statistics 2016-03-18 Lan Jiang , Sumeetpal S. Singh

Objective The coordination of human movement directly reflects function of the central nervous system. Small deficits in movement are often the first sign of an underlying neurological problem. The objective of this research is to develop a…

Computer Vision and Pattern Recognition · Computer Science 2023-02-17 Renjie Li , Chun Yu Lao , Rebecca St. George , Katherine Lawler , Saurabh Garg , Son N. Tran , Quan Bai , Jane Alty

In many robotics and VR/AR applications, fast camera motions lead to a high level of motion blur, causing existing camera pose estimation methods to fail. In this work, we propose a novel framework that leverages motion blur as a rich cue…

Computer Vision and Pattern Recognition · Computer Science 2025-11-27 Jerred Chen , Ronald Clark

Model merging offers a scalable alternative to multi-task learning but often yields suboptimal performance on classification tasks. We attribute this degradation to a geometric misalignment between the merged encoder and static…

Machine Learning · Computer Science 2026-02-03 Fanshuang Kong , Richong Zhang , Zhijie Nie , Hang Zhou , Ziqiao Wang , Qiang Sun , Chunming Hu

Compression technology is essential for efficient image transmission and storage. With the rapid advances in deep learning, images are beginning to be used for image recognition as well as for human vision. For this reason, research has…

Computer Vision and Pattern Recognition · Computer Science 2023-08-29 Takahiro Shindo , Taiju Watanabe , Kein Yamada , Hiroshi Watanabe

Closed-loop neuroscience experimentation, where recorded neural activity is used to modify the experiment on-the-fly, is critical for deducing causal connections and optimizing experimental time. A critical step in creating a closed-loop…

Image and Video Processing · Electrical Eng. & Systems 2024-05-27 Iuliia Dmitrieva , Sergey Babkin , Adam S. Charles

Image copy-move is an operation that replaces one part of the image with another part of the same image, which can be used for illegal purposes due to the potential semantic changes. Recent studies have shown that keypoint-based algorithms…

Computer Vision and Pattern Recognition · Computer Science 2024-06-06 Li Jiang , Zhaowei Lu , Yuebing Gao , Yifan Wang

In vivo calcium imaging through microscopes has enabled deep brain imaging of previously inaccessible neuronal populations within the brains of freely moving subjects. However, microendoscopic data suffer from high levels of background…

Convolutional Architecture for Fast Feature Encoding (CAFFE) [11] is a software package for the training, classifying, and feature extraction of images. The UCF Sports Action dataset is a widely used machine learning dataset that has 200…

Computer Vision and Pattern Recognition · Computer Science 2015-12-24 J. T. Turner , David Aha , Leslie Smith , Kalyan Moy Gupta