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As fusion energy devices advance, plasma simulations are crucial for reactor design. Our work extends BIT1 hybrid parallelization by integrating MPI with OpenMP and OpenACC, focusing on asynchronous multi-GPU programming. Results show…

For a deep learning model, efficient execution of its computation graph is key to achieving high performance. Previous work has focused on improving the performance for individual nodes of the computation graph, while ignoring the…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-26 Linpeng Tang , Yida Wang , Theodore L. Willke , Kai Li

Internet-of-Things end-nodes demand low power processing platforms characterized by heterogeneous dedicated units, controlled by a processor core running concurrent control threads. Such architecture scheme fits one of the main target…

Hardware Architecture · Computer Science 2020-07-20 Abdallah Cheikh , Gianmarco Cerutti , Antonio Mastrandrea , Francesco Menichelli , Mauro Olivieri

Modern OpenMP threading techniques are used to convert the MPI-only Hartree-Fock code in the GAMESS program to a hybrid MPI/OpenMP algorithm. Two separate implementations that differ by the sharing or replication of key data structures…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-08-15 Vladimir Mironov , Yuri Alexeev , Kristopher Keipert , Michael D'mello , Alexander Moskovsky , Mark S. Gordon

We present a lightweight Python framework for distributed training of neural networks on multiple GPUs or CPUs. The framework is built on the popular Keras machine learning library. The Message Passing Interface (MPI) protocol is used to…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-12-19 Dustin Anderson , Jean-Roch Vlimant , Maria Spiropulu

Application development for distributed computing "Grids" can benefit from tools that variously hide or enable application-level management of critical aspects of the heterogeneous environment. As part of an investigation of these issues,…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 N. T. Karonis , B. Toonen , I. Foster

Message Passing Interface (MPI) is a foundational programming model for high-performance computing. MPI libraries traditionally employ network interconnects (e.g., Ethernet and InfiniBand) and network protocols (e.g., TCP and RoCE) with…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-12-16 Xi Wang , Bin Ma , Jongryool Kim , Byungil Koh , Hoshik Kim , Dong Li

Modern interconnects offer remote direct memory access (RDMA) features. Yet, most applications rely on explicit message passing for communications albeit their unwanted overheads. The MPI-3.0 standard defines a programming interface for…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-01 Robert Gerstenberger , Maciej Besta , Torsten Hoefler

Production-quality parallel applications are often a mixture of diverse operations, such as computation- and communication-intensive, regular and irregular, tightly coupled and loosely linked operations. In conventional construction of…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-08-07 Ivy Bo Peng , Roberto Gioiosa , Gokcen Kestor , Erwin Laure , Stefano Markidis

We present a simple and easy to apply methodology for using high-level self-submitting parallel job queues in an MPI environment. Using C++, we implemented a library of functions, MPQueue, both for testing our concepts and for use in real…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-04-23 John M. Neuberger , Nandor Sieben , James W. Swift

The Message Passing Interface (MPI) has been extremely successful as a portable way to program high-performance parallel computers. This success has occurred in spite of the view of many that message passing is difficult and that other…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 William D. Gropp

We evaluate optimized parallel sparse matrix-vector operations for several representative application areas on widespread multicore-based cluster configurations. First the single-socket baseline performance is analyzed and modeled with…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-03-01 Gerald Schubert , Holger Fehske , Georg Hager , Gerhard Wellein

The introduction of Intel(R) Xeon Phi(TM) coprocessors opened up new possibilities in development of highly parallel applications. The familiarity and flexibility of the architecture together with compiler support integrated into the Intel…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-11-26 Jiri Dokulil , Enes Bajrovic , Siegfried Benkner , Sabri Pllana , Martin Sandrieser , Beverly Bachmayer

The I/O access patterns of many parallel applications consist of accesses to a large number of small, noncontiguous pieces of data. If an application's I/O needs are met by making many small, distinct I/O requests, however, the I/O…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Rajeev Thakur , William Gropp , Ewing Lusk

Parallel programs written using the standard Message Passing Interface (MPI) frequently depend upon the ability to efficiently execute collective operations. MPI_Scan is a collective operation defined in MPI that implements parallel prefix…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-08-22 Omer Arap , Martin Swany

Leading HPC systems achieve their status through use of highly parallel devices such as NVIDIA GPUs or Intel Xeon Phi many-core CPUs. The concept of performance portability across such architectures, as well as traditional CPUs, is vital…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-10 Alan Gray , Kevin Stratford

Faults in high-performance systems are expected to be very large in the current exascale computing era. To compensate for a higher failure rate, the standard checkpoint/restart technique would need to create checkpoints at a much higher…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-15 Sarthak Joshi , Sathish Vadhiyar

We discuss the computational bottlenecks in molecular dynamics (MD) and describe the challenges in parallelizing the computation intensive tasks. We present a hybrid algorithm using MPI (Message Passing Interface) with OpenMP threads for…

Computational Physics · Physics 2015-07-28 Anirban Pal , Abhishek Agarwala , Soumyendu Raha , Baidurya Bhattacharya

Dask is a popular parallel and distributed computing framework, which rivals Apache Spark to enable task-based scalable processing of big data. The Dask Distributed library forms the basis of this computing engine and provides support for…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-25 Aamir Shafi , Jahanzeb Maqbool Hashmi , Hari Subramoni , Dhabaleswar K. Panda

The tremendous advance in computer technology in the past decade has made it possible to achieve the performance of a supercomputer on a very small budget. We have built a multi-CPU cluster of Pentium PC capable of parallel computations…

Distributed, Parallel, and Cluster Computing · Computer Science 2009-11-07 X. Q. Luo , E. B. Gregory , J. C. Yang , Y. L. Wang , D. Chang , Y. Lin