Related papers: Amortized Rotation Cost in AVL Trees
We consider the following generalization of the binary search problem. A search strategy is required to locate an unknown target node $t$ in a given tree $T$. Upon querying a node $v$ of the tree, the strategy receives as a reply an…
A sorted set (or map) is one of the most used data types in computer science. In addition to standard set operations, like Insert, Remove, and Contains, it can provide set-set operations such as Union,Intersection, and Difference. Each of…
The weighted ancestor problem on a rooted node-weighted tree $T$ is a generalization of the classic predecessor problem: construct a data structure for a set of integers that supports fast predecessor queries. Both problems are known to…
Rotation distances measure the differences in structure between rooted ordered binary trees. The one-dimensional skeleta of associahedra are rotation graphs, where two vertices representing trees are connected by an edge if they differ by a…
Three standard subtree transfer operations for binary trees, used in particular for phylogenetic trees, are: tree bisection and reconnection ($TBR$), subtree prune and regraft ($SPR$) and rooted subtree prune and regraft ($rSPR$). For a…
Billey et al. [arXiv:1507.04976] have recently discovered a surprisingly simple formula for the number $a_n(\sigma)$ of leaf-labelled rooted non-embedded binary trees (also known as phylogenetic trees) with $n\geq 1$ leaves, fixed (for the…
Red-black (RB) trees are one of the most efficient variants of balanced binary search trees. However, they have always been blamed for being too complicated, hard to explain, and not suitable for pedagogical purposes. In the pioneering work…
The problem of reconstructing evolutionary trees or phylogenies is of great interest in computational biology. A popular model for this problem assumes that we are given the set of leaves (current species) of an unknown binary tree and the…
A flip in a plane spanning tree $T$ is the operation of removing one edge from $T$ and adding another edge such that the resulting structure is again a plane spanning tree. For trees on a set of points in convex position we study two…
It is an open question whether there exists a polynomial-time algorithm for computing the rotation distances between pairs of extended ordered binary trees. The problem of computing the rotation distance between an arbitrary pair of trees,…
We consider a natural variant of the well-known Feedback Vertex Set problem, namely the problem of deleting a small subset of vertices or edges to a full binary tree. This version of the problem is motivated by real-world scenarios that are…
We propose a method for cutting down a random recursive tree that focuses on its higher degree vertices. Enumerate the vertices of a random recursive tree of size $n$ according to a decreasing order of their degrees; namely, let…
A data structure is presented for the Mergeable Dictionary abstract data type, which supports the following operations on a collection of disjoint sets of totally ordered data: Predecessor-Search, Split and Merge. While Predecessor-Search…
We consider the phylogenetic tree reconstruction problem with insertions and deletions (indels). Phylogenetic algorithms proceed under a model where sequences evolve down the model tree, and given sequences at the leaves, the problem is to…
The tree share structure proposed by Dockins et al. is an elegant model for tracking disjoint ownership in concurrent separation logic, but decision procedures for tree shares are hard to implement due to a lack of a systematic theoretical…
We study the amortized number of combinatorial changes (edge insertions and removals) needed to update the graph structure of the Voronoi diagram $\mathcal{V}(S)$ (and several variants thereof) of a set $S$ of $n$ sites in the plane as…
We analyze union-find using potential functions motivated by continuous algorithms, and give alternate proofs of the $O(\log\log{n})$, $O(\log^{*}n)$, $O(\log^{**}n)$, and $O(\alpha(n))$ amortized cost upper bounds. The proof of the…
Enumeration algorithms have been one of recent hot topics in theoretical computer science. Different from other problems, enumeration has many interesting aspects, such as the computation time can be shorter than the total output size, by…
We develop the first fully dynamic algorithm that maintains a decision tree over an arbitrary sequence of insertions and deletions of labeled examples. Given $\epsilon > 0$ our algorithm guarantees that, at every point in time, every node…
We study distorted metrics on binary trees in the context of phylogenetic reconstruction. Given a binary tree $T$ on $n$ leaves with a path metric $d$, consider the pairwise distances $\{d(u,v)\}$ between leaves. It is well known that these…