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THIS IS A CORRECTED VERSION INCLUDING AN APPENDED CORRIGENDUM. Best match graphs arise naturally as the first processing intermediate in algorithms for orthology detection. Let $T$ be a phylogenetic (gene) tree $T$ and $\sigma$ an…
The strong vertex (edge) span of a given graph $G$ is the maximum distance that two players can maintain at all times while visiting all vertices (edges) of $G$ and moving either to an adjacent vertex or staying in the current position…
Let $G$ be a graph on $n$ vertices. For $i\in \{0,1\}$ and a connected graph $G$, a spanning forest $F$ of $G$ is called an $i$-perfect forest if every tree in $F$ is an induced subgraph of $G$ and exactly $i$ vertices of $F$ have even…
We consider the problem of approximating the arboricity of a graph $G= (V,E)$, which we denote by $\mathsf{arb}(G)$, in sublinear time, where the arboricity of a graph is the minimal number of forests required to cover its edges. An…
Let $T$ be a tree, a vertex of degree one is a leaf of $T$ and a vertex of degree at least three is a branch vertex of $T$. For two distinct vertices $u,v$ of $T$, let $P_T[u,v]$ denote the unique path in $T$ connecting $u$ and $v.$ For a…
Let $(X,\mathbf{d})$ be a metric space, $V\subseteq X$ a finite set, and $E \subseteq V \times V$. We call the graph $G(E,V)$ a {\em metric} graph if each edge $(u,v) \in E$ has weight $d(u,v)$. In particular edge $(u,u)$ is in the graph…
Given a connected graph $G=(V,E)$ and a length function $\ell:E\to {\mathbb R}$ we let $d_{v,w}$ denote the shortest distance between vertex $v$ and vertex $w$. A $t$-spanner is a subset $E'\subseteq E$ such that if $d'_{v,w}$ denotes…
Given an $n$-vertex non-negatively real-weighted graph $G$, whose vertices are partitioned into a set of $k$ clusters, a \emph{clustered network design problem} on $G$ consists of solving a given network design optimization problem on $G$,…
Polytrees are a subclass of Bayesian networks that seek to capture the conditional dependencies between a set of $n$ variables as a directed forest and are motivated by their more efficient inference and improved interpretability. Since the…
We consider the $s$-$t$-path TSP: given a finite metric space with two elements $s$ and $t$, we look for a path from $s$ to $t$ that contains all the elements and has minimum total distance. We improve the approximation ratio for this…
There are many classical problems in P whose time complexities have not been improved over the past decades. Recent studies of "Hardness in P" have revealed that, for several of such problems, the current fastest algorithm is the best…
The diameter of a graph is one if its most important parameters, being used in many real-word applications. In particular, the diameter dictates how fast information can spread throughout data and communication networks. Thus, it is a…
Let $k$, $d$ be a positive integer, $G$ be a connected graph of order $n$, $T$ be a tree. The leaf distance of a tree is defined as the minimum distance between any two leaves. For $v\in V(T)$, the leaf degree of $v$ in $T$ is the number of…
The {\sc Directed Maximum Leaf Out-Branching} problem is to find an out-branching (i.e. a rooted oriented spanning tree) in a given digraph with the maximum number of leaves. In this paper, we obtain two combinatorial results on the number…
The three-in-a-tree problem is to determine if a simple undirected graph contains an induced subgraph which is a tree connecting three given vertices. Based on a beautiful characterization that is proved in more than twenty pages,…
Given a graph $G=(V,E)$, a $\beta$-ruling set is a subset $S\subseteq V$ that is i) independent, and ii) every node $v\in V$ has a node of $S$ within distance $\beta$. In this paper we present almost optimal distributed algorithms for…
The problem considered is the following. Given a graph with edge weights satisfying the triangle inequality, and a degree bound for each vertex, compute a low-weight spanning tree such that the degree of each vertex is at most its specified…
For an integer $k$, a $k$-tree is a tree with maximum degree at most $k$. More generally, if $f$ is an integer-valued function on vertices, an $f$-tree is a tree in which each vertex $v$ has degree at most $f(v)$. Let $c(G)$ denote the…
Given a directed graph $G=(V,A)$, the Directed Maximum Leaf Spanning Tree problem asks to compute a directed spanning tree (i.e., an out-branching) with as many leaves as possible. By designing a Branch-and-Reduced algorithm combined with…
Let G be a string graph (an intersection graph of continuous arcs in the plane) with m edges. Fox and Pach proved that G has a separator consisting of O(m^{3/4}\sqrt{log m})$ vertices, and they conjectured that the bound of O(\sqrt m)…