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The task of automatically segmenting 3-D surfaces representing boundaries of objects is important for quantitative analysis of volumetric images, and plays a vital role in biomedical image analysis. Recently, graph-based methods with a…
Quantitative image analysis often depends on accurate classification of pixels through a segmentation process. However, imaging artifacts such as the partial volume effect and sensor noise complicate the classification process. These…
This work presents an unsupervised deep learning scheme that exploiting high-dimensional assisted score-based generative model for color image restoration tasks. Considering that the sample number and internal dimension in score-based…
In this paper, we present a new multiscale domain decomposition algorithm for computing solutions of static Eikonal equations. The new method is an iterative two-scale method that uses a parareal-like update scheme in combination with…
Segment Anything Models (SAMs), known for their exceptional zero-shot segmentation performance, have garnered significant attention in the research community. Nevertheless, their performance drops significantly on severely degraded,…
Lesion segmentation, in contrast to natural scene segmentation, requires handling subtle variations in texture and color, frequent imaging artifacts (such as hairs, rulers, and bubbles), and a critical need for precise boundary localization…
We present {\mu}Split, a dedicated approach for trained image decomposition in the context of fluorescence microscopy images. We find that best results using regular deep architectures are achieved when large image patches are used during…
A central problem in neuroscience is reconstructing neuronal circuits on the synapse level. Due to a wide range of scales in brain architecture such reconstruction requires imaging that is both high-resolution and high-throughput. Existing…
Gradient-based algorithms are crucial to modern computer-vision and graphics applications, enabling learning-based optimization and inverse problems. For example, photorealistic differentiable rendering pipelines for color images have been…
The automated segmentation of cerebral aneurysms is pivotal for accurate diagnosis and treatment planning. Confronted with significant domain shifts and class imbalance in 3D Rotational Angiography (3DRA) data from various medical…
Problems in differentiable rendering often involve optimizing scene parameters that cause motion in image space. The gradients for such parameters tend to be sparse, leading to poor convergence. While existing methods address this sparsity…
In the field of connectomics, neuroscientists seek to identify cortical connectivity comprehensively. Neuronal boundary detection from the Electron Microscopy (EM) images is often done to assist the automatic reconstruction of neuronal…
In the last years, automated segmentation has become a necessary tool for volume electron microscopy (EM) imaging. So far, the best performing techniques have been largely based on fully supervised encoder-decoder CNNs, requiring a…
In this paper, we explore how conventional image enhancement can improve model robustness in medical image analysis. By applying commonly used normalization methods to images from various vendors and studying their influence on model…
Image inpainting plays a vital role in restoring missing image regions and supporting high-level vision tasks, but traditional methods struggle with complex textures and large occlusions. Although Transformer-based approaches have…
Unpaired image translation algorithms can be used for sim2real tasks, but many fail to generate temporally consistent results. We present a new approach that combines differentiable rendering with image translation to achieve temporal…
Grayscale image colorization is a fascinating application of AI for information restoration. The inherently ill-posed nature of the problem makes it even more challenging since the outputs could be multi-modal. The learning-based methods…
Neural networks have proven their capabilities by outperforming many other approaches on regression or classification tasks on various kinds of data. Other astonishing results have been achieved using neural nets as data generators,…
Initializing optical flow field by either sparse descriptor matching or dense patch matches has been proved to be particularly useful for capturing large displacements. In this paper, we present a pyramidal gradient matching approach that…
Scanning Electron Microscopy (SEM) is pivotal in revealing intricate micro- and nanoscale features across various research fields. However, obtaining high-resolution SEM images presents challenges, including prolonged scanning durations and…