Related papers: Parameterized mixed cluster editing via modular de…
In the Bicluter Editing problem the input is a graph $G$ and an integer $k$, and the goal is to decide whether $G$ can be transformed into a bicluster graph by adding and removing at most $k$ edges. In this paper we give an algorithm for…
For a family of graphs $\cal F$, the $\mathcal{F}$-Contraction problem takes as an input a graph $G$ and an integer $k$, and the goal is to decide if there exists $S \subseteq E(G)$ of size at most $k$ such that $G/S$ belongs to $\cal F$.…
Motivated by applications in social and biological network analysis, we introduce a new form of agnostic clustering termed~\emph{motif correlation clustering}, which aims to minimize the cost of clustering errors associated with both edges…
We consider edge modification problems towards block and strictly chordal graphs, where one is given an undirected graph $G = (V,E)$ and an integer $k \in \mathbb{N}$ and seeks to edit (add or delete) at most $k$ edges from $G$ to obtain a…
We introduce the s-Plex Cluster Vertex Deletion problem. Like the Cluster Vertex Deletion problem, it is NP-hard and motivated by graph-based data clustering. While the task in Cluster Vertex Deletion is to delete vertices from a graph so…
It is known that a number of natural graph problems which are FPT parameterized by treewidth become W-hard when parameterized by clique-width. It is therefore desirable to find a different structural graph parameter which is as general as…
Clustering a graph, i.e., assigning its nodes to groups, is an important operation whose best known application is the discovery of communities in social networks. Graph clustering and community detection have traditionally focused on…
We define a general variant of the graph clustering problem where the criterion of density for the clusters is (high) connectivity. In {\sc Clustering to Given Connectivities}, we are given an $n$-vertex graph $G$, an integer $k$, and a…
Graph editing problems offer an interesting perspective on sub- and supergraph identification problems for a large variety of target properties. They have also attracted significant attention in recent years, particularly in the area of…
Cluster deletion is an NP-hard graph clustering objective with applications in computational biology and social network analysis, where the goal is to delete a minimum number of edges to partition a graph into cliques. We first provide a…
Kernelization algorithms, usually a preprocessing step before other more traditional algorithms, are very special in the sense that they return (reduced) instances, instead of final results. This characteristic excludes the freedom of…
We consider the Trivially Perfect Editing problem, where one is given an undirected graph $G = (V,E)$ and a parameter $k \in \mathbb{N}$ and seeks to edit (add or delete) at most $k$ edges from $G$ to obtain a trivially perfect graph. The…
A matching cut of a graph is a partition of its vertex set in two such that no vertex has more than one neighbor across the cut. The Matching Cut problem asks if a graph has a matching cut. This problem, and its generalization d-cut, has…
Coarse-grained (CG) modeling simplifies molecular systems by mapping groups of atoms into representative units. However, traditional CG approaches rely on fixed mapping rules, which limit their ability to handle diverse chemical systems and…
Rank aggregation seeks a representative permutation for a collection of rankings and plays a central role in areas such as social choice, information retrieval, and computational biology. Two fundamental aggregation tasks are the center and…
Spectral clustering (SC) is a popular clustering technique to find strongly connected communities on a graph. SC can be used in Graph Neural Networks (GNNs) to implement pooling operations that aggregate nodes belonging to the same cluster.…
Graph clustering or community detection constitutes an important task for investigating the internal structure of graphs, with a plethora of applications in several domains. Traditional techniques for graph clustering, such as spectral…
A recent trend in data mining has explored (hyper)graph clustering algorithms for data with categorical relationship types. Such algorithms have applications in the analysis of social, co-authorship, and protein interaction networks, to…
We develop a new framework for generalizing approximation algorithms from the structural graph algorithm literature so that they apply to graphs somewhat close to that class (a scenario we expect is common when working with real-world…
A mixed dominating set $S$ of a graph $G=(V,E)$ is a subset $ S \subseteq V \cup E$ such that each element $v\in (V \cup E) \setminus S$ is adjacent or incident to at least one element in $S$. The mixed domination number $\gamma_m(G)$ of a…