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Related papers: A combinatorial approach to knot recognition

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Knotted molecules occur naturally and are designed by scientists to gain special biological and material properties. Understanding and utilizing knotting require efficient methods to recognize and generate knotted structures, which are…

Computational Physics · Physics 2025-01-23 Zhiyu Zhang , Yongjian Zhu , Liang Dai

Graph colouring is a combinatorial optimisation problem with applications in several important domains, including sports scheduling, cartography, street map navigation, and timetabling. It is also of significant theoretical interest and a…

History and Overview · Mathematics 2026-02-23 Rhyd Lewis

While the problem of knot classification is far from solved, it is possible to create computer programs that can be used to tabulate knots up to a desired degree of complexity. Here we discuss the main ideas on which such programs can be…

q-alg · Mathematics 2008-02-03 Charilaos Aneziris

The aim of this paper is to define certain algebraic structures coming from generalized Reidemeister moves of singular knot theory. We give examples, show that the set of colorings by these algebraic structures is an invariant of singular…

Geometric Topology · Mathematics 2018-06-21 Indu R. U. Churchill , M. Elhamdadi , M. Hajij , Sam Nelson

We introduce a way to color the regions of a classical knot diagram using ternary operations, so that the number of colorings is a knot invariant. By choosing appropriate substitutions in the algebras that we assign to diagrams, one obtains…

Geometric Topology · Mathematics 2019-10-29 Maciej Niebrzydowski

We introduce two new families of polynomial invariants of oriented classical and virtual knots and links defined as decategorfications of the quandle coloring quiver. We provide examples to illustrate the computation of the invariants, show…

Geometric Topology · Mathematics 2025-08-18 Anusha Kabra , Sam Nelson

The goal of this note is to present a combinatorial mechanism for counting certain objects associated to a variety X defined over a finite field. The basic example is that of counting conjugacy classes in GL_n(F_q), where X is the…

Number Theory · Mathematics 2018-03-30 Fernando Rodriguez Villegas

We determine p-colorability of the paradromic rings. These rings arise by generalizing the well-known experiment of bisecting a Mobius strip. Instead of joining the ends with a single half twist, use $m$ twists, and, rather than bisecting…

Geometric Topology · Mathematics 2019-01-07 James Godzik , Nancy Ho , Jennifer Jones , Thomas W. Mattman , Dan Sours

The goal of this paper is to discuss the possibility of finding an algorithm that can give all distinct knots up to a desired complexity. Two such algorithms are presented, one based on projections on a plane, the other on closed…

q-alg · Mathematics 2008-02-03 Charilaos Aneziris

We look into computational aspects of two classical knot invariants. We look for ways of simplifying the computation of the coloring invariant and of the Alexander module. We support our ideas with explicit computations on pretzel knots.

Geometric Topology · Mathematics 2007-05-23 Pedro Lopes

Geometric representations of cycles in quandle homology theory are given in terms of colored knot diagrams. Abstract knot diagrams are generalized to diagrams with exceptional points which, when colored, correspond to degenerate cycles.…

Geometric Topology · Mathematics 2007-05-23 J. Scott Carter , Seiichi Kamada , Masahico Saito

We enhance the quandle coloring quiver invariant of oriented knots and links with quandle modules. This results in a two-variable polynomial invariant with specializes to the previous quandle module polynomial invariant as well as to the…

Geometric Topology · Mathematics 2020-11-12 Karma Istanbouli , Sam Nelson

This paper is base on talks which I gave in May, 2010 at Workshop in Trieste (ICTP). In the first part we present an introduction to knots and knot theory from an historical perspective, starting from Summerian knots and ending on Fox…

Geometric Topology · Mathematics 2011-05-12 Jozef H. Przytycki

A quandle coloring quiver is a quiver structure, introduced by Karina Cho and Sam Nelson, which is defined on the set of quandle colorings of an oriented knot or link by a finite quandle. We study quandle coloring quivers of (p, 2)-torus…

Geometric Topology · Mathematics 2022-09-13 Jagdeep Basi , Carmen Caprau

We study the structure of the augmented fundamental quandle of a knot whose complement contains an incompressible torus. We obtain the relationship between the fundamental quandle of a satellite knot and the fundamental quandles/groups of…

Geometric Topology · Mathematics 2024-01-05 Marco Bonatto , Alessia Cattabriga , Eva Horvat

This paper shows how the study of colored compositions of integers reveals some unexpected and original connection with the Invert operator. The Invert operator becomes an important tool to solve the problem of directly counting the number…

Number Theory · Mathematics 2014-09-24 Marco Abrate , Stefano Barbero , Umberto Cerruti , Nadir Murru

Folded linear molecular chains are ubiquitous in biology. Folding is mediated by intra-chain interactions that "glue" two or more regions of a chain. The resulting fold topology is widely believed to be a determinant of biomolecular…

Geometric Topology · Mathematics 2021-07-21 Jose Ceniceros , Mohamed Elhamdadi , Alireza Mashaghi

In this short survey article we collect the current state of the art in the nascent field of \textit{quantum enhancements}, a type of knot invariant defined by collecting values of quantum invariants of knots with colorings by various…

Geometric Topology · Mathematics 2026-02-19 Sam Nelson

To study embeddings of tangles in knots, we use quandle cocycle invariants. Computations are carried out for the tables of knots and tangles, to investigate which tangles may or may not embed in knots in the tables.

Geometric Topology · Mathematics 2007-05-23 Kheira Ameur , Mohamed Elhamdadi , Tom Rose , Masahico Saito , Chad Smudde

We make use of the 3D nature of knots and links to find savings in computational complexity when computing knot invariants such as the linking number and, in general, most finite type invariants. These savings are achieved in comparison…

Geometric Topology · Mathematics 2024-01-15 Dror Bar-Natan , Itai Bar-Natan , Iva Halacheva , Nancy Scherich