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Related papers: Fundamental Limits to Cellular Sensing

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This paper demonstrates fundamental limits of sensor networks for detection problems where the number of hypotheses is exponentially large. Such problems characterize many important applications including detection and classification of…

Information Theory · Computer Science 2016-11-17 Yaron Rachlin , Rohit Negi , Pradeep Khosla

Molecular Communications (MC) uses molecules as information carriers between nanomachines. MC channel in practice can be crowded with different types of molecules, i.e., ligands, which can have similar binding properties causing severe…

Emerging Technologies · Computer Science 2019-08-13 Murat Kuscu , Ozgur B. Akan

Cells need to reliably sense external ligand concentrations to achieve various biological functions such as chemotaxis or signaling. The molecular recognition of ligands by surface receptors is degenerate in many systems leading to…

The precision of concentration sensing is improved when cells communicate. Here we derive the physical limits to concentration sensing for cells that communicate over short distances by directly exchanging small molecules (juxtacrine…

Biological Physics · Physics 2017-03-15 Sean Fancher , Andrew Mugler

Intracellular transmission of information via chemical and transcriptional networks is thwarted by a physical limitation: the finite copy number of the constituent chemical species introduces unavoidable intrinsic noise. Here we provide a…

Molecular Networks · Quantitative Biology 2010-08-27 Andrew Mugler , Aleksandra M. Walczak , Chris H. Wiggins

Recent advances in quantum sensing -- optical clocks at $5.5\times 10^{-19}$ systematic uncertainty, frequency-dependent squeezing below the standard quantum limit, quantum magnetometers approaching fundamental sensitivity limits -- raise a…

General Relativity and Quantum Cosmology · Physics 2026-03-10 Sergio Gaudio

Cellular decision making is based on regulatory circuits that associate signal thresholds to specific physiological actions. This transmission of information is subjected to molecular noise what can decrease its fidelity. Here, we show…

Molecular Networks · Quantitative Biology 2017-02-08 Guillermo Rodrigo , Juan F. Poyatos

Information transmission in biological signaling circuits has often been described using the metaphor of a noise filter. Cellular systems need accurate, real-time data about their environmental conditions, but the biochemical reaction…

Molecular Networks · Quantitative Biology 2019-02-27 David Hathcock , James Sheehy , Casey Weisenberger , Efe Ilker , Michael Hinczewski

Experimental evidence lends support to the conjecture that the ability of chains of cells to sense the gradient of an external chemical concentration could rely on cell-to-cell communication. This is the basis for the gradient sensing…

Quantitative Methods · Quantitative Biology 2021-02-24 Dallas Foster , Collin Victor , Brian Frost , Juan M. Restrepo

Molecular Communications (MC) is a bio-inspired communication technique that uses molecules to transfer information among bio-nano devices. In this paper, we focus on the detection problem for biological MC receivers employing ligand…

Emerging Technologies · Computer Science 2021-05-13 Murat Kuscu , Ozgur B. Akan

Cooperativity arising from local interactions in equilibrium receptor systems provides gain, but does not increase sensory performance, as measured by the signal-to-noise ratio (SNR) due to a fundamental tradeoff between gain and intrinsic…

Molecular Networks · Quantitative Biology 2013-07-12 Monica Skoge , Sahin Naqvi , Yigal Meir , Ned S. Wingreen

Cells must continuously sense and respond to time-varying environmental stimuli. These signals are transmitted and processed by biochemical signalling networks. However, the biochemical reactions making up these networks are intrinsically…

Molecular Networks · Quantitative Biology 2015-05-18 Filipe Tostevin , Pieter Rein ten Wolde

Living cells use readout molecules to record the state of receptor proteins, similar to measurements or copies in typical computational devices. But is this analogy rigorous? Can cells be optimally efficient, and if not, why? We show that,…

Statistical Mechanics · Physics 2017-04-19 Thomas E. Ouldridge , Pieter Rein ten Wolde

In recent years, many peculiar sensors have been proposed, such as the sensors based on exceptional points, Parity-Time symmetric structures or non-reciprocal systems. It is crucial to evaluate the fundamental limit of these sensing schemes…

Quantum Physics · Physics 2022-12-01 Qi Geng , Ka-Di Zhu

Cells are constantly exposed to fluctuating environmental conditions. External signals are sensed, processed and integrated by cellular signal transduction networks, which translate input signals into specific cellular responses by means of…

Molecular Networks · Quantitative Biology 2012-05-29 Pau Rué , Núria Domedel-Puig , Jordi Garcia-Ojalvo , Antonio J. Pons

Cells often have tens of thousands of receptors, even though only a few activated receptors can trigger full cellular responses. Reasons for the overabundance of receptors remain unclear. We suggest that, in certain conditions, the large…

Molecular Networks · Quantitative Biology 2014-02-04 Xiang Cheng , Lina Merchan , Martin Tchernookov , Ilya Nemenman

A cognitive radio system has the ability to observe and learn from the environment, adapt to the environmental conditions, and use the radio spectrum more efficiently. It allows secondary users (SUs) to use the primary users (PUs) channels…

Information Theory · Computer Science 2018-02-13 Fatima Salahdine

Pervasive localization is essential for continuous tracking applications, yet existing solutions face challenges in balancing power consumption and accuracy. GPS, while precise, is impractical for continuous tracking of micro-assets due to…

Systems and Control · Electrical Eng. & Systems 2025-05-12 Aritrik Ghosh , Nakul Garg , Nirupam Roy

One major challenge for living cells is the measurement and prediction of signals corrupted by noise. In general, cells need to make decisions based on their compressed representation of noisy, time-varying signals. Strategies for signal…

Quantitative Methods · Quantitative Biology 2023-07-07 Jenny Poulton , Age Tjalma , Lotte Slim , Pieter Rein ten Wolde

Cooperative interactions among sensory receptors provide a general mechanism to increase the sensitivity of signal transduction. In particular, bacterial chemotaxis receptors interact cooperatively to produce an ultrasensitive response to…

Molecular Networks · Quantitative Biology 2011-10-19 Monica Skoge , Yigal Meir , Ned S. Wingreen