English
Related papers

Related papers: The evolutionary origins of hierarchy

200 papers

The possibility that evolutionary forces -- together with a few fundamental factors such as thermodynamic constraints, specific computational features enabling information processing, and ecological processes -- might constrain the logic of…

Biological Physics · Physics 2025-12-30 Manlio De Domenico

A central premise in evolutionary biology is that individual variation can generate information asymmetries that facilitate the emergence of hierarchical organisation. To examine this process, we develop an agent-based model (ABM) to…

Multiagent Systems · Computer Science 2026-05-06 Shanshan Mao , Peter Tino

Existing studies have demonstrated significant sex differences in the neural mechanisms of daily life and neuropsychiatric disorders. The hierarchical organization of the functional brain network is a critical feature for assessing these…

Neurons and Cognition · Quantitative Biology 2024-09-25 Wenyu Chen , Ling Zhan , Tao Jia

Modular organization characterizes many complex networks occurring in nature, including the brain. In this paper we show that modular structure may be responsible for increasing the robustness of certain dynamical states of such systems. In…

Disordered Systems and Neural Networks · Physics 2015-05-27 Neeraj Pradhan , Subinay Dasgupta , Sitabhra Sinha

The presence of hierarchy in many real-world networks is not yet fully explained. Complex interaction networks are often coarse-grain models of vast modular networks, where tightly connected subgraphs are agglomerated into nodes for…

Physics and Society · Physics 2021-02-24 C. Tyler Diggans , Jeremie Fish , Erik Bollt

Human social hierarchy has the unique characteristic of existing in two forms. Firstly, as an informal hierarchy where leaders and followers are implicitly defined by their personal characteristics, and secondly, as an institutional…

Populations and Evolution · Quantitative Biology 2019-07-04 Cedric Perret , Emma Hart , Simon T. Powers

Aim of this paper is to provide preliminary elements for discussion about the implications of the Hierarchy Theory of Evolution on the design and evolution of artificial systems and socio-technical organizations. In order to achieve this…

Other Computer Science · Computer Science 2017-03-09 Vincenzo De Florio

The co-evolution of structure and dynamics, known as adaptivity, is a fundamental property in various systems and drives diverse emergent behaviors. However, the adaptivity in previous works is primarily stemmed from pairwise situations,…

Physics and Society · Physics 2025-08-22 Longzhao Liu , Hongwei Zheng , Zhihao Han , Xin Wang , Shaoting Tang

The architecture of biological networks has been reported to exhibit high level of modularity, and to some extent, topological modules of networks overlap with known functional modules. However, how the modular topology of the molecular…

Molecular Networks · Quantitative Biology 2007-09-07 Jing Zhao , Guo-Hui Ding , Lin Tao , Hong Yu , Zhong-Hao Yu , Jian-Hua Luo , Zhi-Wei Cao , Yi-Xue Li

We describe the dynamics of a simple adaptive network. The network architecture evolves to a number of disconnected components on which the dynamics is characterized by the possibility of differently synchronized nodes within the same…

Adaptation and Self-Organizing Systems · Physics 2015-05-28 V. Botella-Soler , P. Glendinning

Networks describing the interaction of the elements that constitute a complex system grow and develop via a number of different mechanisms, such as the addition and deletion of nodes, the addition and deletion of edges, as well as the…

Molecular Networks · Quantitative Biology 2010-06-09 Arend Hintze , Christoph Adami

The structure of interactions in most of animals and human societies can be best represented by complex hierarchical networks. In order to maintain close to optimal functioning both stability and adaptability are necessary. Here we…

Physics and Society · Physics 2018-02-20 Maryam Zamani , Leonardo Camargo-Forero , Tamas Vicsek

Constraints placed upon the phenotypes of organisms result from their interactions with the environment. Over evolutionary timescales, these constraints feed back onto smaller molecular subnetworks comprising the organism. The evolution of…

Molecular Networks · Quantitative Biology 2015-06-10 Cameron Smith , Ximo Pechuan , Raymond S. Puzio , Daniel Biro , Aviv Bergman

Neural networks show a progressive increase in complexity during the time course of evolution. From diffuse nerve nets in Cnidaria to modular, hierarchical systems in macaque and humans, there is a gradual shift from simple processes…

Neurons and Cognition · Quantitative Biology 2011-12-23 Marcus Kaiser , Sreedevi Varier

Software evolution is a fundamental process that transcends the realm of technical artifacts and permeates the entire organizational structure of a software project. By means of a longitudinal empirical study of 18 large open-source…

Software Engineering · Computer Science 2016-10-20 Mitchell Joblin , Sven Apel , Wolfgang Mauerer

Many natural and engineered complex networks have intricate mesoscopic organization, e.g., the clustering of the constituent nodes into several communities or modules. Often, such modularity is manifested at several different hierarchical…

Physics and Society · Physics 2015-05-30 Sitabhra Sinha , Swarup Poria

Biological and social systems are structured at multiple scales, and the incentives of individuals who interact in a group may diverge from the collective incentive of the group as a whole. Mechanisms to resolve this tension are responsible…

Populations and Evolution · Quantitative Biology 2023-05-31 Daniel B. Cooney , Simon A. Levin , Yoichiro Mori , Joshua B. Plotkin

Gene regulatory networks constitute the first layer of the cellular computation for cell adaptation and surveillance. In these webs, a set of causal relations is built up from thousands of interactions between transcription factors and…

Molecular Networks · Quantitative Biology 2009-11-30 Carlos Rodriguez-Caso , Bernat Corominas-Murtra , Ricard V. Solé

The ubiquity of modules in biological networks may result from an evolutionary benefit of a modular organization. For instance, modularity may increase the rate of adaptive evolution, because modules can be easily combined into new…

Molecular Networks · Quantitative Biology 2011-08-26 Areejit Samal , Andreas Wagner , Olivier C. Martin

The recent discovery of universal principles underlying many complex networks occurring across a wide range of length scales in the biological world has spurred physicists in trying to understand such features using techniques from…

Biological Physics · Physics 2015-05-13 Sitabhra Sinha