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We study the problem of unsupervised discovery and segmentation of object parts, which, as an intermediate local representation, are capable of finding intrinsic object structure and providing more explainable recognition results. Recent…

Computer Vision and Pattern Recognition · Computer Science 2021-05-27 Shilong Liu , Lei Zhang , Xiao Yang , Hang Su , Jun Zhu

Increasing data set sizes of 3D microscopy imaging experiments demand for an automation of segmentation processes to be able to extract meaningful biomedical information. Due to the shortage of annotated 3D image data that can be used for…

Image and Video Processing · Electrical Eng. & Systems 2022-02-02 Dennis Eschweiler , Richard S. Smith , Johannes Stegmaier

In this paper, we propose an unsupervised method for hyperspectral remote sensing image segmentation. The method exploits the mean-shift clustering algorithm that takes as input a preliminary hyperspectral superpixels segmentation together…

Computer Vision and Pattern Recognition · Computer Science 2022-10-10 Mirko Paolo Barbato , Paolo Napoletano , Flavio Piccoli , Raimondo Schettini

Medical image segmentation is almost the most important pre-processing procedure in computer-aided diagnosis but is also a very challenging task due to the complex shapes of segments and various artifacts caused by medical imaging, (i.e.,…

Image and Video Processing · Electrical Eng. & Systems 2023-04-26 Hao Du , Qihua Dong , Yan Xu , Jing Liao

Cell detection is a fundamental task in computational pathology that can be used for extracting high-level medical information from whole-slide images. For accurate cell detection, pathologists often zoom out to understand the tissue-level…

Accurate segmentation of 3-D cell nuclei in microscopy images is essential for the study of nuclear organization, gene expression, and cell morphodynamics. Current image segmentation methods are challenged by the complexity and variability…

Image and Video Processing · Electrical Eng. & Systems 2022-03-18 Sundaresh Ram , Jeffrey J. Rodriguez

Cardiac segmentation is in great demand for clinical practice. Due to the enormous labor of manual delineation, unsupervised segmentation is desired. The ill-posed optimization problem of this task is inherently challenging, requiring…

Image and Video Processing · Electrical Eng. & Systems 2023-01-18 Sihan Wang , Fuping Wu , Lei Li , Zheyao Gao , Byung-Woo Hong , Xiahai Zhuang

Separating overlapped nuclei is a major challenge in histopathology image analysis. Recently published approaches have achieved promising overall performance on public datasets; however, their performance in segmenting overlapped nuclei are…

Image and Video Processing · Electrical Eng. & Systems 2020-02-05 Haotian Wang , Min Xian , Aleksandar Vakanski

Automatic tumor segmentation is a crucial step in medical image analysis for computer-aided diagnosis. Although the existing methods based on convolutional neural networks (CNNs) have achieved the state-of-the-art performance, many…

Image and Video Processing · Electrical Eng. & Systems 2020-05-11 Shuchao Pang , Anan Du , Mehmet A. Orgun , Yan Wang , Quanzheng Sheng , Shoujin Wang , Xiaoshui Huang , Zhemei Yu

Cervical cancer, the fourth leading cause of cancer in women globally, requires early detection through Pap smear tests to identify precancerous changes and prevent disease progression. In this study, we performed a focused analysis by…

Image and Video Processing · Electrical Eng. & Systems 2025-05-22 Abdul Samad Shaik , Shashaank Mattur Aswatha , Rahul Jashvantbhai Pandya

Cell segmentation and tracking in microscopy images are of great significance to new discoveries in biology and medicine. In this study, we propose a novel approach to combine cell segmentation and cell tracking into a unified end-to-end…

Computer Vision and Pattern Recognition · Computer Science 2021-02-23 Yuqian Chen , Yang Song , Chaoyi Zhang , Fan Zhang , Lauren O'Donnell , Wojciech Chrzanowski , Weidong Cai

The panoptic segmentation task requires a unified result from semantic and instance segmentation outputs that may contain overlaps. However, current studies widely ignore modeling overlaps. In this study, we aim to model overlap relations…

Computer Vision and Pattern Recognition · Computer Science 2019-11-19 Yibo Yang , Hongyang Li , Xia Li , Qijie Zhao , Jianlong Wu , Zhouchen Lin

Small liver lesions common to colorectal liver metastases (CRLMs) are challenging for convolutional neural network (CNN) segmentation models, especially when we have a wide range of slice thicknesses in the computed tomography (CT) scans.…

Image and Video Processing · Electrical Eng. & Systems 2023-08-31 Mohammad Hamghalam , Richard K. G. Do , Amber L. Simpson

3D cell segmentation methods are often hindered by \emph{oversegmentation}, where a single cell is incorrectly split into multiple fragments. This degrades the final segmentation quality and is notoriously difficult to resolve, as…

Computer Vision and Pattern Recognition · Computer Science 2025-12-22 Peter Chen , Bryan Chang , Olivia A Creasey , Julie Beth Sneddon , Zev J Gartner , Yining Liu

Robust automated organ segmentation is a prerequisite for computer-aided diagnosis (CAD), quantitative imaging analysis and surgical assistance. For high-variability organs such as the pancreas, previous approaches report undesirably low…

Computer Vision and Pattern Recognition · Computer Science 2016-03-08 Amal Farag , Le Lu , Holger R. Roth , Jiamin Liu , Evrim Turkbey , Ronald M. Summers

Several image pattern recognition tasks rely on superpixel generation as a fundamental step. Image analysis based on superpixels facilitates domain-specific applications, also speeding up the overall processing time of the task. Recent…

Computer Vision and Pattern Recognition · Computer Science 2018-02-19 Marcelo Santos , Luciano Oliveira

Live cell culture is crucial in biomedical studies for analyzing cell properties and dynamics in vitro. This study focuses on segmenting unstained live cells imaged with bright-field microscopy. While many segmentation approaches exist for…

Quantitative Methods · Quantitative Biology 2025-08-26 Surajit Das , Gourav Roy , Pavel Zun

A difficult step in the process of karyotyping is segmenting chromosomes that touch or overlap. In an attempt to automate the process, previous studies turned to Deep Learning methods, with some formulating the task as a semantic…

Machine Learning · Computer Science 2022-03-25 Daniel Kluvanec , Thomas B. Phillips , Kenneth J. W. McCaffrey , Noura Al Moubayed

Cervical cancer is a prevalent disease affecting millions of women worldwide every year. It requires significant attention, as early detection during the precancerous stage provides an opportunity for a cure. The screening and diagnosis of…

Image and Video Processing · Electrical Eng. & Systems 2023-10-26 Hana Ahmadzadeh Sarhangi , Dorsa Beigifard , Elahe Farmani , Hamidreza Bolhasani

Semi-supervised learning (SSL), which aims at leveraging a few labeled images and a large number of unlabeled images for network training, is beneficial for relieving the burden of data annotation in medical image segmentation. According to…

Image and Video Processing · Electrical Eng. & Systems 2022-02-15 Xinkai Zhao , Chaowei Fang , De-Jun Fan , Xutao Lin , Feng Gao , Guanbin Li