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Polymer models are used to describe chromatin, which can be folded at different spatial scales by binding molecules. By folding, chromatin generates loops of various sizes. We present here a randomly cross-linked (RCL) polymer model, where…

Soft Condensed Matter · Physics 2017-05-12 Ofir Shukron , David Holcman

In this paper, we study a model of directed polymers in random environment, where the environment is restricted to a time-space tube whose spatial width grows polynomially with time. It can be viewed as an interpolation between the…

Probability · Mathematics 2022-02-23 Ran Wei , Jinjiong Yu

The probability distribution for the free energy of directed polymers in random media (DPRM) with uncorrelated noise in $d=1+1$ dimensions satisfies the Tracy-Widom distribution. We inquire if and how this universal distribution is modified…

Statistical Mechanics · Physics 2016-07-06 Sherry Chu , Mehran Kardar

We study the relation between the directed polymer and the directed percolation models, for the case of a disordered energy landscape where the energies are taken from bimodal distribution. We find that at the critical concentration of the…

Statistical Mechanics · Physics 2009-10-31 Ehud Perlsman , Shlomo Havlin

We consider directed polymers in a random potential given by a deterministic profile with a strong maximum at the origin taken with random sign at each integer time. We study two main objects based on paths in this random potential. First,…

Probability · Mathematics 2009-09-15 Yuri Bakhtin , Konstantin Khanin

We reassess the relation between classical lattice dimer models and the continuum elastic description of a lattice of fluctuating polymers. In the absence of randomness we determine the density and line tension of the polymers in terms of…

Statistical Mechanics · Physics 2015-06-25 Ying Jiang , Thorsten Emig

We study the passage (translocation) of a self-avoiding polymer through a membrane pore in two dimensions. In particular, we numerically measure the probability distribution Q(T) of the translocation time T, and the distribution P(s,t) of…

Statistical Mechanics · Physics 2009-02-12 Clément Chatelain , Yacov Kantor , Mehran Kardar

Probabilistic models of directed polymers in random environment have received considerable attention in recent years. Much of this attention has focused on integrable models. In this paper, we introduce some new computational tools that do…

Probability · Mathematics 2021-06-08 Erik Bates , Sourav Chatterjee

In this paper I propose very simple statistical "memory model" of one-dimensional directed polymers which is capable to store and retrieve a given random quenched trajectory. The model is defined in terms of the elastic string Hamiltonian…

Statistical Mechanics · Physics 2022-10-05 Victor Dotsenko

The one dimensional direct polymer in random media model is investigated using a variational approach in the replica space. We demonstrate numerically that the stable point is a maximum and the corresponding statistical properties for the…

Disordered Systems and Neural Networks · Physics 2007-05-23 Andrea Pagnani

For polyhedral convex cones in ${\mathbb R}^d$, we give a proof for the conic kinematic formula for conic curvature measures, which avoids the use of characterization theorems. For the random cones defined as typical cones of an isotropic…

Metric Geometry · Mathematics 2017-06-13 Rolf Schneider

We consider the continuum directed random polymer (CDRP) model that arises as a scaling limit from $1+1$ dimensional directed polymers in the intermediate disorder regime. We show that for a point-to-point polymer of length $t$ and any…

Probability · Mathematics 2022-04-05 Sayan Das , Weitao Zhu

The impact of impenetrable obstacles on the energetics and equilibrium structure of strongly repulsive directed polymers is investigated. As a result of the strong interactions, regions of severe polymer depletion and excess are found in…

Soft Condensed Matter · Physics 2013-08-30 Anton Souslov , D. Zeb Rocklin , Paul M. Goldbart

We consider the unbinding of a directed polymer in a random media from a wall in $d=1+1$ dimensions and a simple one-dimensional model for DNA unzipping. Using the replica trick we show that the restricted partition functions of these…

Statistical Mechanics · Physics 2007-05-23 Yariv Kafri , Anatoli Polkovnikov

This paper describes directed polymer on general time-correlated random field. Law of large numbers, existence and smoothness of limiting free energies are proved at all temperature. We also display the delocalized-localized transition, via…

Probability · Mathematics 2024-12-20 Jiaming Chen

In this paper, we consider directed polymers in random environment with long range jumps in discrete space and time. We extend to this case some techniques, results and classifications known in the usual short range case. However, some…

Probability · Mathematics 2007-05-23 Francis Comets

We consider a statistical mechanics model for biopolymers. Sophisticated polymer chains, such as DNA, have stiffness when they stretch chains. The Laplacian interaction is used to describe the stiffness. Also, the surface between two media…

Probability · Mathematics 2014-08-05 Chien-Hao Huang

We consider field theory formulation for directed polymers and interfaces in the presence of quenched disorder. We write a series representation for the averaged free energy, where all the integer moments of the partition function of the…

Statistical Mechanics · Physics 2020-05-08 Róbinson J. Acosta Diaz , Christian D. Rodríguez-Camargo , Nami F. Svaiter

Modeling of polymer chains has received a lot of attention in mathematics. In fact, probabilistic models that naturally arise in statistical mechanics have been widely studied by mathematicians for the very challenging and novel problems…

Probability · Mathematics 2007-05-23 Francesco Caravenna

In this article we study from a non-perturbative point of view the entanglement of two directed polymers subjected to repulsive interactions given by a Dirac $\delta-$function potential. An exact formula of the so-called second moment of…

Soft Condensed Matter · Physics 2009-11-10 Franco Ferrari , Vakhtang G. Rostiashvili , Thomas A. Vilgis