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Eukaryotic cells are able to sense chemical gradients in a wide range of environments. We show that, if a cell is exposed to a highly variable environment, it may gain chemotactic accuracy by expressing multiple receptor types with varying…

Cell Behavior · Quantitative Biology 2020-11-04 Austin Hopkins , Brian A. Camley

Many systems in biology and beyond employ collaborative, collective communication strategies for improved efficiency and adaptive benefit. One such paradigm of particular interest is the community estimation of a dynamic signal, when, for…

Adaptation and Self-Organizing Systems · Physics 2020-07-01 Mohammadreza Bahadorian , Christoph Zechner , Carl Modes

Concurrent presence of inter-cell and intra-cell interferences constitutes a major impediment to reliable downlink transmission in multi-cell multiuser networks. Harnessing such interferences largely hinges on two levels of information…

Information Theory · Computer Science 2016-08-24 Ali Tajer , Xiaodong Wang

This paper considers a sequential estimation and sensor scheduling problem with one sensor and one estimator. The sensor makes sequential observations about the state of an underlying memoryless stochastic process, and makes a decision as…

Systems and Control · Computer Science 2016-11-17 Xiaobin Gao , Emrah Akyol , Tamer Basar

We present a hybrid systems framework for multi-agent optimization in which agents execute computations in continuous time and communicate in discrete time. The optimization algorithm is a hybrid version of parallelized coordinate descent.…

Optimization and Control · Mathematics 2021-10-04 Katherine Hendrickson , Dawn Hustig-Schultz , Matthew Hale , Ricardo G. Sanfelice

The performance and efficiency of distributed training of Deep Neural Networks highly depend on the performance of gradient averaging among all participating nodes, which is bounded by the communication between nodes. There are two major…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-02-10 Linnan Wang , Wei Wu , Junyu Zhang , Hang Liu , George Bosilca , Maurice Herlihy , Rodrigo Fonseca

In genetic networks, information of relevance to the organism is represented by the concentrations of transcription factor molecules. In order to extract this information the cell must effectively "measure"' these concentrations, but there…

Molecular Networks · Quantitative Biology 2025-02-13 Marianne Bauer , Mariela D. Petkova , Thomas Gregor , Eric F. Wieschaus , William Bialek

Collective cell migration in response to a chemical cue occurs in many biological processes such as morphogenesis and cancer metastasis. Clusters of migratory cells in these systems are capable of responding to gradients of less than 1%…

Biological Physics · Physics 2016-08-24 Julien Varennes , Bumsoo Han , Andrew Mugler

The reliable detection of environmental molecules in the presence of noise is an important cellular function, yet the underlying computational mechanisms are not well understood. We introduce a model of two interacting sensors which allows…

Biological Physics · Physics 2020-02-25 Vudtiwat Ngampruetikorn , David J. Schwab , Greg J. Stephens

We study a class of distributed optimization algorithms that aim to alleviate high communication costs by allowing clients to perform multiple local gradient-type training steps before communication. In a recent breakthrough, Mishchenko et…

Machine Learning · Computer Science 2025-06-11 Artavazd Maranjyan , Mher Safaryan , Peter Richtárik

Interference limits performance in wireless networks, and cooperation among receivers or transmitters can help mitigate interference by forming distributed MIMO systems. Earlier work shows how limited receiver cooperation helps mitigate…

Information Theory · Computer Science 2010-05-03 I-Hsiang Wang , David N. C. Tse

Many eukaryotic cells are able to perform directional mechanosensing by directly measuring minute spatial differences in the mechanical stress on their membranes. Here, we explore the limits of a single mechanosensitive channel activation…

Biological Physics · Physics 2022-09-29 Roland Bouffanais , Jianmin Sun , Dick K. P. Yue

We consider large scale distributed optimization over a set of edge devices connected to a central server, where the limited communication bandwidth between the server and edge devices imposes a significant bottleneck for the optimization…

Optimization and Control · Mathematics 2021-12-28 Yujie Tang , Vikram Ramanathan , Junshan Zhang , Na Li

During development, morphogen gradients precisely determine the position of gene expression boundaries despite the inevitable presence of fluctuations. Recent experiments suggest that some morphogen gradients may be interpreted prior to…

Molecular Networks · Quantitative Biology 2009-11-30 Timothy E Saunders , Martin Howard

Cellular behaviors such as migration, division, and differentiation rely on precise timing, and yet the molecular events that govern these behaviors are highly stochastic. We investigate regulatory strategies that decrease the timing noise…

Biological Physics · Physics 2020-07-01 Shivam Gupta , Sean Fancher , Hendrik C. Korswagen , Andrew Mugler

Most decisions require information gathering from a stimulus presented with different gaps. Indeed, the brain process of this integration is rarely ambiguous. Recently, it has been claimed that humans can optimally integrate the information…

Neurons and Cognition · Quantitative Biology 2018-10-29 Maryam Tohidi-Moghaddam , Sajjad Zabbah , Farzaneh Olianezhad , Reza Ebrahimpour

We analyze (stochastic) gradient descent (SGD) with delayed updates on smooth quasi-convex and non-convex functions and derive concise, non-asymptotic, convergence rates. We show that the rate of convergence in all cases consists of two…

Machine Learning · Computer Science 2021-06-17 Sebastian U. Stich , Sai Praneeth Karimireddy

A large number of eukaryotic cells are able to directly detect external chemical gradients with great accuracy and the ultimate limit to their sensitivity has been a topic of debate for many years. Previous work has been done to understand…

Cell Behavior · Quantitative Biology 2015-05-20 Stuart A. Sevier , Herbert Levine

Radio communication over interstellar distances is studied, accounting for noise, dispersion, scattering and motion. Large transmitted powers suggest maximizing power efficiency (ratio of information rate to average signal power) as opposed…

Instrumentation and Methods for Astrophysics · Physics 2016-03-01 David G. Messerschmitt

In this paper, diffusion-based molecular commu- nication with ligand receptor receivers is studied. Information messages are assumed to be encoded via variations of the con- centration of molecules. The randomness in the ligand reception…

Information Theory · Computer Science 2015-11-10 Mehrdad Tahmasbi , Faramarz Fekri
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