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Related papers: A Robust Approach for Identifying Gene-Environment…

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Factorization Machines (FMs) are a supervised learning approach that enhances the linear regression model by incorporating the second-order feature interactions. Despite effectiveness, FM can be hindered by its modelling of all feature…

Machine Learning · Computer Science 2017-08-17 Jun Xiao , Hao Ye , Xiangnan He , Hanwang Zhang , Fei Wu , Tat-Seng Chua

Genomic instability, the propensity of aberrations in chromosomes, plays a critical role in the development of many diseases. High throughput genotyping experiments have been performed to study genomic instability in diseases. The output of…

Methodology · Statistics 2009-08-27 Pei Wang , Dennis L. Chao , Li Hsu

Complex diseases are multifactorial traits caused by both genetic and environmental factors. They represent the most part of human diseases and include those with largest prevalence and mortality (cancer, heart disease, obesity, etc.).…

Quantitative Methods · Quantitative Biology 2009-05-08 Roberto Amato , Michele Pinelli , Daniel D'Andrea , Gennaro Miele , Mario Nicodemi , Giancarlo Raiconi , Sergio Cocozza

Quadratic regression goes beyond the linear model by simultaneously including main effects and interactions between the covariates. The problem of interaction estimation in high dimensional quadratic regression has received extensive…

Methodology · Statistics 2019-01-23 Cheng Wang , Binyan Jiang , Liping Zhu

Adversarial examples pose many security threats to convolutional neural networks (CNNs). Most defense algorithms prevent these threats by finding differences between the original images and adversarial examples. However, the found…

Computer Vision and Pattern Recognition · Computer Science 2022-01-27 Li Chen , Qi Li , Weiye Chen , Zeyu Wang , Haifeng Li

Arsenic (As), a widespread environmental toxin, poses major health risks due to its inorganic forms (iAs), which are linked to cancer, cardiovascular disease, and endocrine disruption. Although its toxic effects have been extensively…

Genomics · Quantitative Biology 2025-10-23 Sujit Silas Armstrong Suthahar , Patrick Allard

This paper presents a novel approach to multi-robot collision avoidance that integrates global path planning with local navigation strategies, utilizing attentive graph neural networks to manage dynamic interactions among agents. We…

Robotics · Computer Science 2026-03-06 Jonas le Fevre Sejersen , Toyotaro Suzumura , Erdal Kayacan

Motivation: The discovery of relationships between gene expression measurements and phenotypic responses is hampered by both computational and statistical impediments. Conventional statistical methods are less than ideal because they either…

Methodology · Statistics 2019-07-16 Lei Ding , Daniel J. McDonald

Rapid advancements in genome sequencing have led to the collection of vast amounts of genomics data. Researchers may be interested in using machine learning models on such data to predict the pathogenicity or clinical significance of a…

Quantitative Methods · Quantitative Biology 2024-08-15 Arshmeet Kaur , Morteza Sarmadi

Joint Bayesian factor models are popular for characterizing relationships between multivariate correlated predictors and a response variable. Standard models assume that all variables, including both the predictors and the response, are…

Methodology · Statistics 2025-05-19 Glenn Palmer , David B. Dunson

Many diseases and traits involve a complex interplay between genes and environment, generating significant interest in studying gene-environment interaction through observational data. However, for lifestyle and environmental risk factors,…

Methodology · Statistics 2023-09-22 Malka Gorfine , Conghui Qu , Ulrike Peters , Li Hsu

Genome-wide association studies, in which as many as a million single nucleotide polymorphisms (SNP) are measured on several thousand samples, are quickly becoming a common type of study for identifying genetic factors associated with many…

Methodology · Statistics 2010-10-25 Charles Kooperberg , Michael LeBlanc , James Y. Dai , Indika Rajapakse

While meta-analyzing retrospective cancer patient cohorts, an investigation of differences in the expressions of target oncogenes across cancer subtypes is of substantial interest because the results may uncover novel tumorigenesis…

Methodology · Statistics 2023-07-03 Subharup Guha , David C. Christiani , S. V. Subramanian , Yi Li

Cognizance of gene-environment interactions may help prevent or detain the onset of complex diseases like cardiovascular disease, cancer, type2 diabetes, autism or asthma by adjustments to lifestyle. In this regard, we extend the Bayesian…

Applications · Statistics 2017-07-25 Durba Bhattacharya , Sourabh Bhattacharya

Spatial prediction is commonly achieved under the assumption of a Gaussian random field (GRF) by obtaining maximum likelihood estimates of parameters, and then using the kriging equations to arrive at predicted values. For massive datasets,…

Methodology · Statistics 2021-07-20 Karl T. Pazdernik , Ranjan Maitra

Subject to intricate environmental variables, the precise classification of jamming signals holds paramount significance in the effective implementation of anti-jamming strategies within communication systems. In light of this imperative,…

Signal Processing · Electrical Eng. & Systems 2024-06-27 Xuhui Ding , Yue Zhang , Gaoyang Li , Xiaozheng Gao , Neng Ye , Dusit Niyato , Kai Yang

Identifying anomalies and contamination in datasets is important in a wide variety of settings. In this paper, we describe a new technique for estimating contamination in large, discrete valued datasets. Our approach considers the normal…

Information Theory · Computer Science 2015-06-16 Matthew L. Malloy , Scott Alfeld , Paul Barford

Urbanization enables economic growth but also harms the environment through degradation. Traditional methods of detecting environmental issues have proven inefficient. Machine learning has emerged as a promising tool for tracking…

Machine Learning · Computer Science 2024-05-29 Anirudh Mazumder , Sarthak Engala , Aditya Nallaparaju

Encountering shifted data at test time is a ubiquitous challenge when deploying predictive models. Test-time adaptation (TTA) methods address this issue by continuously adapting a deployed model using only unlabeled test data. While TTA can…

Machine Learning · Computer Science 2025-11-11 Mona Schirmer , Metod Jazbec , Christian A. Naesseth , Eric Nalisnick

We propose a test-time defense mechanism against adversarial attacks: imperceptible image perturbations that significantly alter the predictions of a model. Unlike existing methods that rely on feature filtering or smoothing, which can lead…

Computer Vision and Pattern Recognition · Computer Science 2025-10-06 Dong Lao , Yuxiang Zhang , Haniyeh Ehsani Oskouie , Yangchao Wu , Alex Wong , Stefano Soatto