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In most domains of network analysis researchers consider networks that arise in nature with weighted edges. Such networks are routinely dichotomized in the interest of using available methods for statistical inference with networks. The…

Methodology · Statistics 2016-11-10 James D. Wilson , Matthew J. Denny , Shankar Bhamidi , Skyler Cranmer , Bruce Desmarais

Given a graph, we associate each edge with the transposition which exchanges the endvertices. Fixing a linear order on the edge set, we obtain a permutation of the vertices. D\'enes proved that the permutation is a full cyclic permutation…

Combinatorics · Mathematics 2024-04-04 Shuhei Tsujie , Ryo Uchiumi

Graphs are a generalized concept that encompasses more complex data structures than trees, such as difference lists, doubly-linked lists, skip lists, and leaf-linked trees. Normally, these structures are handled with destructive assignments…

Programming Languages · Computer Science 2022-09-13 Jin Sano , Naoki Yamamoto , Kazunori Ueda

The biologically inspired framework of port-graphs has been successfully used to specify complex systems. It is the basis of the PORGY modelling tool. To facilitate the specification of proof normalisation procedures via graph rewriting, in…

Logic in Computer Science · Computer Science 2012-11-20 Maribel Fernández , Sébastien Maulat

We present a simple proof for the universality of invariant and equivariant tensorized graph neural networks. Our approach considers a restricted intermediate hypothetical model named Graph Homomorphism Model to reach the universality…

Machine Learning · Computer Science 2019-10-10 Takanori Maehara , Hoang NT

We show that any graph that is generically globally rigid in $\mathbb{R}^d$ has a realization in $\mathbb{R}^d$ that is both generic and universally rigid. This also implies that the graph also must have a realization in $\mathbb{R}^d$ that…

Metric Geometry · Mathematics 2018-08-15 Robert Connelly , Steven J. Gortler , Louis Theran

I will present a way to implement graph algorithms which is different from traditional methods. This work was motivated by the belief that some ideas from software engineering should be applied to graph algorithms. Re-usability of software…

Data Structures and Algorithms · Computer Science 2010-03-24 Marco Nissen

We introduce a categorical formalism for rewriting surface-embedded graphs. Such graphs can represent string diagrams in a non-symmetric setting where we guarantee that the wires do not intersect each other. The main technical novelty is a…

Logic in Computer Science · Computer Science 2023-08-01 Malin Altenmüller , Ross Duncan

For a graph $\mathbb{Q}=(\mathbb{V},\mathbb{E})$, the transformation graphs are defined as graphs with vertex set being $\mathbb{V(Q)} \cup \mathbb{E(Q)}$ and edge set is described following certain conditions. In comparison to the…

Discrete Mathematics · Computer Science 2024-10-15 Parvez Ali , Annmaria Baby , D. Antony Xavier , Theertha Nair A , Haidar Ali , Syed Ajaz K. Kirmani

In this paper we discuss reconstruction problems for graphs. We develop some new ideas like isomorphic extension of isomorphic graphs, partitioning of vertex sets into sets of equivalent points, subdeck property, etc. and develop an…

General Mathematics · Mathematics 2011-10-21 Dhananjay P. Mehendale

Many scientific datasets are of high dimension, and the analysis usually requires visual manipulation by retaining the most important structures of data. Principal curve is a widely used approach for this purpose. However, many existing…

Artificial Intelligence · Computer Science 2016-01-19 Qi Mao , Li Wang , Ivor W. Tsang , Yijun Sun

Graphs and various graph-like combinatorial structures, such as preorders and hypergraphs, are ubiquitous in programming. This paper focuses on representing graphs in a purely functional programming language like Haskell. There are several…

Programming Languages · Computer Science 2022-02-21 Andrey Mokhov

Partition refinement is a method for minimizing automata and transition systems of various types. Recently, we have developed a partition refinement algorithm that is generic in the transition type of the given system and matches the run…

Data Structures and Algorithms · Computer Science 2020-11-26 Thorsten Wißmann , Hans-Peter Deifel , Stefan Milius , Lutz Schröder

We propose the use of hyperedge replacement graph grammars for factor graphs, or factor graph grammars (FGGs) for short. FGGs generate sets of factor graphs and can describe a more general class of models than plate notation, dynamic…

Machine Learning · Computer Science 2020-10-26 David Chiang , Darcey Riley

Recently, transformer architectures for graphs emerged as an alternative to established techniques for machine learning with graphs, such as (message-passing) graph neural networks. So far, they have shown promising empirical results, e.g.,…

Machine Learning · Computer Science 2024-04-01 Luis Müller , Mikhail Galkin , Christopher Morris , Ladislav Rampášek

The topic of this treatise is a combinatorial technique called Graph Pebbling. We investigate pebbling numbers, weight functions, flow networks, hypercubes, and the zero-sum conjecture of Erd\H{o}s and Lemke. This investigation is a…

Combinatorics · Mathematics 2023-05-01 Herman Bergwerf

Graph rewiring has emerged as a key technique to alleviate over-squashing in Graph Neural Networks (GNNs) and Graph Transformers by modifying the graph topology to improve information flow. While effective, rewiring inherently alters the…

Machine Learning · Computer Science 2025-10-24 Alexandre Benoit , Catherine Aitken , Yu He

Graph transformation is the rule-based modification of graphs, and is a discipline dating back to the 1970s. In general, to match the left-hand graph of a fixed rule within a host graph requires polynomial time, but to improve matching…

Logic in Computer Science · Computer Science 2021-01-05 Graham Campbell , Detlef Plump

We present a new approach to termination analysis of logic programs. The essence of the approach is that we make use of general term-orderings (instead of level mappings), like it is done in transformational approaches to logic program…

Programming Languages · Computer Science 2007-05-23 Alexander Serebrenik , Danny De Schreye

We study the derivational complexity of rewrite systems whose termination is provable in the dependency pair framework using the processors for reduction pairs, dependency graphs, or the subterm criterion. We show that the derivational…

Logic in Computer Science · Computer Science 2011-03-29 Georg Moser , Andreas Schnabl
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