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Related papers: Optimal Time-Series Motifs

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One of the most important concepts in biological network analysis is that of network motifs, which are patterns of interconnections that occur in a given network at a frequency higher than expected in a random network. In this work we are…

Discrete Mathematics · Computer Science 2020-05-29 Diego P Rubert , Eloi Araujo , Marco A Stefanes , Jens Stoye , Fábio V Martinez

Investigating the frequency and distribution of small subgraphs with a few nodes/edges, i.e., motifs, is an effective analysis method for static networks. Motif-driven analysis is also useful for temporal networks where the spectrum of…

Social and Information Networks · Computer Science 2021-05-04 Penghang Liu , Valerio Guarrasi , A. Erdem Sarıyüce

Detecting repeating patterns of different lengths in time series, also called variable-length motifs, has received a great amount of attention by researchers and practitioners. Despite the significant progress that has been made in recent…

Machine Learning · Computer Science 2019-11-22 Yifeng Gao , Jessica Lin

Time series motif discovery has been a fundamental task to identify meaningful repeated patterns in time series. Recently, time series chains were introduced as an expansion of time series motifs to identify the continuous evolving patterns…

Machine Learning · Computer Science 2022-11-07 Li Zhang , Yan Zhu , Yifeng Gao , Jessica Lin

We introduce a new method for finding network motifs: interesting or informative subgraph patterns in a network. Subgraphs are motifs when their frequency in the data is high compared to the expected frequency under a null model. To compute…

Machine Learning · Computer Science 2021-04-19 Peter Bloem , Steven de Rooij

Temporal networks are commonly used to represent systems where connections between elements are active only for restricted periods of time, such as networks of telecommunication, neural signal processing, biochemical reactions and human…

Data Analysis, Statistics and Probability · Physics 2011-11-15 Lauri Kovanen , Márton Karsai , Kimmo Kaski , János Kertész , Jari Saramäki

Detecting repeated variable-length patterns, also called variable-length motifs, has received a great amount of attention in recent years. Current state-of-the-art algorithm utilizes fixed-length motif discovery algorithm as a subroutine to…

Data Structures and Algorithms · Computer Science 2018-02-15 Yifeng Gao , Jessica Lin

Temporal graphs are structures which model relational data between entities that change over time. Due to the complex structure of data, mining statistically significant temporal subgraphs, also known as temporal motifs, is a challenging…

Social and Information Networks · Computer Science 2021-10-05 Antonio Longa , Giulia Cencetti , Bruno Lepri , Andrea Passerini

Finding an effective medical treatment often requires a search by trial and error. Making this search more efficient by minimizing the number of unnecessary trials could lower both costs and patient suffering. We formalize this problem as…

Machine Learning · Computer Science 2021-02-18 Samuel Håkansson , Viktor Lindblom , Omer Gottesman , Fredrik D. Johansson

Network motifs are recurrent, small-scale patterns of interactions observed frequently in a system. They shed light on the interplay between the topology and the dynamics of complex networks across various domains. In this work, we focus on…

Social and Information Networks · Computer Science 2023-11-08 Quintino Francesco Lotito , Federico Musciotto , Federico Battiston , Alberto Montresor

Visibility algorithms transform time series into graphs and encode dynamical information in their topology, paving the way for graph-theoretical time series analysis as well as building a bridge between nonlinear dynamics and network…

Data Analysis, Statistics and Probability · Physics 2016-05-11 Jacopo Iacovacci , Lucas Lacasa

Pattern counting in graphs is fundamental to network science tasks, and there are many scalable methods for approximating counts of small patterns, often called motifs, in large graphs. However, modern graph datasets now contain richer…

Social and Information Networks · Computer Science 2018-10-03 Paul Liu , Austin Benson , Moses Charikar

It is of great significance to identify the characteristics of time series to qualify their similarity. We define six types of triadic time-series motifs and investigate the motif occurrence profiles extracted from logistic map, chaotic…

Physics and Society · Physics 2022-08-23 Wen-Jie Xie , Rui-Qi Han , Wei-Xing Zhou

We consider the problem of sampling and approximately counting an arbitrary given motif $H$ in a graph $G$, where access to $G$ is given via queries: degree, neighbor, and pair, as well as uniform edge sample queries. Previous algorithms…

Data Structures and Algorithms · Computer Science 2021-07-20 Amartya Shankha Biswas , Talya Eden , Ronitt Rubinfeld

The mining of pattern subgraphs, known as motifs, is a core task in the field of graph mining. Edges in real-world networks often have timestamps, so there is a need for temporal motif mining. A temporal motif is a richer structure that…

Databases · Computer Science 2025-07-29 Yunjie Pan , Omkar Bhalerao , C. Seshadhri , Nishil Talati

An ideal outcome of pattern mining is a small set of informative patterns, containing no redundancy or noise, that identifies the key structure of the data at hand. Standard frequent pattern miners do not achieve this goal, as due to the…

Data Structures and Algorithms · Computer Science 2019-02-11 Nikolaj Tatti , Jilles Vreeken

Sequence models are a critical component of modern NLP systems, but their predictions are difficult to explain. We consider model explanations though rationales, subsets of context that can explain individual model predictions. We find…

Computation and Language · Computer Science 2021-11-19 Keyon Vafa , Yuntian Deng , David M. Blei , Alexander M. Rush

Many time series, particularly health data streams, can be best understood as a sequence of phenomenon or events, which we call \textit{motifs}. A time series motif is a short trace segment which may implicitly capture an underlying…

Machine Learning · Computer Science 2025-05-26 Josephine Lamp , Mark Derdzinski , Christopher Hannemann , Sam Hatfield , Joost van der Linden

Recently, interest has grown in exploring the hypothesis that neural activity conveys information through precise spiking motifs. To investigate this phenomenon, various algorithms have been proposed to detect such motifs in Single Unit…

Neurons and Cognition · Quantitative Biology 2023-09-27 Laurent U Perrinet

In complex systems, groups of interacting objects may form prevalent and persistent spatiotemporal patterns, which we refer to as motifs. These motifs can exhibit features that reveal how individual objects interact with one another.…

Biological Physics · Physics 2025-12-12 Ying Chen Lim , Rakesh Das , Tetsuya Hiraiwa , N. Duane Loh