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Decay in time of undriven weakly collisional kinetic plasma turbulence in systems large compared to the ion kinetic scales is investigated using fully electromagnetic particle-in-cell simulations initiated with transverse flow and magnetic…

Plasma Physics · Physics 2015-06-16 P. Wu , M. Wan , W. H. Matthaeus , M. A. Shay , M. Swisdak

The thermal degradation of a graphene-like two-dimensional triangular membrane with bonds undergoing temperature-induced scission is studied by means of Molecular Dynamics simulation using Langevin thermostat. We demonstrate that the…

Soft Condensed Matter · Physics 2015-05-30 J. Paturej , H. Popova , A. Milchev , T. A. Vilgis

We study the dynamics of hydration water/protein association in folded proteins, using lysozyme and myoglobin as examples. Extensive molecular dynamics simulations are performed to identify underlying mechanisms of the dynamical transition…

Soft Condensed Matter · Physics 2015-05-13 J. Servantie , C. Atilgan , A. R. Atilgan

Exposing a solution to a temperature gradient can lead to the accumulation of particles on either the cold or warm side. This phenomenon, known as thermophoresis, has been discovered more than a century ago, and yet its microscopic origin…

Statistical Mechanics · Physics 2023-01-02 Shiling Liang , Daniel Maria Busiello , Paolo De Los Rios

While uniform temperature has no effect on equilibrium properties of hard-core systems, its gradient might substantially change their behaviour. In particular, in hard-disk system subject to temperature difference $\Delta T$ disks are…

Statistical Mechanics · Physics 2015-05-18 Sebastian Woloszczuk , Adam Lipowski

Atomic displacements of hydrated proteins are dominated by phonon vibrations at low temperatures and by dissipative large-amplitude motions at high temperatures. A crossover between the two regimes is known as a dynamical transition. Recent…

Biological Physics · Physics 2010-11-05 Dmitry V. Matyushov , Alexander Y. Morozov

We use an analytic model to study how inhomogeneous hydrogen reionization affects the temperature distribution of the intergalactic medium (IGM). During this process, the residual energy of each ionizing photon is deposited in the IGM as…

Cosmology and Nongalactic Astrophysics · Physics 2015-05-13 Steven Furlanetto , S. Peng Oh

Neuronal cells change their growth properties in response to external physical stimuli such as variations in external temperature, stiffness of the growth substrate, or topographical guidance cues. Detailed knowledge of the mechanisms that…

Biological Physics · Physics 2013-10-10 Elise Spedden , David L. Kaplan , Cristian Staii

The methyl groups in hexamethylbenzene C$_6$(CH$_3$)$_6$ become magnetically ordered at the molecular level below 118 K. This is also near the temperature at which the system structurally transitions from triclinic to a unique near-cubic…

Strongly Correlated Electrons · Physics 2018-12-07 Fei Yen

Non-central heavy ion collisions lead to the production of a quark gluon plasma with angular momentum. We investigate, using holographic AdS/QCD models, how does rotation of the medium affects the confinement/deconfinement transition…

High Energy Physics - Theory · Physics 2022-05-25 Nelson R. F. Braga , Luiz F. Faulhaber , Octavio C. Junqueira

Based on experimental results, this work proposes the influence of the Oxygen order present in the Ortho-II superstructure of YBa$_2$Cu$_3$O$_{7-\delta}$ (YBCO), on the final ordering of Oxygens in its Orthorhombic phase for $\delta$…

Superconductivity · Physics 2026-04-09 Roberto F. Luccas , Lorenzo Gallo , Cesar E. Sobrero , Jorge A. Malarría

A microscopic model for thermal excitation of vibrational ground state of a molecule interacting with a condensed medium is developed. The master equation for evolution of occupancies of the vibrational levels is derived. The rate constant…

Statistical Mechanics · Physics 2011-03-04 V. I. Teslenko , D. Y. Iatsenko

High-temperature thermopower is interpreted as entropy that a carrier carries. Owing to spin and orbital degrees of freedom, a transition metal perovskite exhibits large thermopower at high temperatures. In this paper, we revisit the…

Strongly Correlated Electrons · Physics 2021-12-15 Wataru Kobayashi

The theory of mesoscopic fluctuations is applied to inhomogeneous solids consisting of chaotically distributed regions with different crystalline structure. This approach makes it possible to describe statistical properties of such mixture…

Statistical Mechanics · Physics 2015-06-25 V. I. Yukalov

We investigate the crystallization of crosslinked and entangled polymers under external deformation using a coarse-grained poly(vinyl alcohol) (CG-PVA) model and molecular dynamics simulations. Following uniaxial deformation, the systems…

Soft Condensed Matter · Physics 2026-01-19 Atmika Bhardwaj , Huzaifa Shabbir , Jens-Uwe Sommer , Marco Werner

We present the results from three dimensional hydrodynamical simulations of decaying high-speed turbulence in dense molecular clouds. We compare our results, which include a detailed cooling function, molecular hydrogen chemistry and a…

Astrophysics · Physics 2009-11-07 Georgi Pavlovski , Michael D. Smith , Mordecai-Mark Mac Low , Alexander Rosen

Microgels are often discussed as well-suited model system for soft colloids. In contrast to rigid spheres, the microgel volume and, coupled to this, the volume fraction in dispersion can be manipulated by external stimuli. This behavior is…

For several decades, experimental and computational studies have been used to investigate the potential functional role of knots in protein structures. A property that has attracted considerable attention is thermal stability, i.e., the…

Biomolecules · Quantitative Biology 2026-03-13 João N. C. Especial , Beatriz P. Teixeira , Ana Nunes , Miguel Machuqueiro , Patrícia F. N. Faísca

We discuss how the thermalization of an elementary quantum system is modified when the system is placed in an environment out of thermal equilibrium. To this aim we provide a detailed investigation of the dynamics of an atomic system placed…

Quantum Physics · Physics 2013-01-16 Bruno Bellomo , Riccardo Messina , Didier Felbacq , Mauro Antezza

Centrifugation is a commonly performed laboratory procedure that helps to separate blood cells such as $RBCs$, $WBCs$, and platelets from plasma or serum. Although centrifugation is a routine procedure in most medical laboratories, the…

Biological Physics · Physics 2023-01-25 Mesfin Taye