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In comparative and developmental neuroanatomy one encounters questions regarding the deformation of neural tissue under stress. The motivation of this note is an observation (Barbas {\it et al}) that at cortical folds or gyri, the layers of…

Tissues and Organs · Quantitative Biology 2007-05-23 Partha P. Mitra

Using field theoretic approach, we study equilibrium shape deformation of a vesicle induced by the presence of enclosed flexible polymers, which is a simple model of drug delivery system or endocytosis. To evaluate the total free energy of…

Soft Condensed Matter · Physics 2015-05-20 Yutaka Oya , Katsuhiko Sato , Toshihiro Kawakatsu

A simple phenomenological model for describing the conformational dynamics of biological macromolecules via the nonlinearity-induced instabilities is proposed. It is shown that the interaction between charges and bending degrees of freedom…

Soft Condensed Matter · Physics 2009-11-11 Yu. B. Gaididei , P. L. Christiansen , W. J. Zakrzewski

Random packings of stiff rods are self-supporting mechanical structures stabilized by long range interactions induced by contacts. To understand the geometrical and topological complexity of the packings, we first deploy X-ray computerized…

Soft Condensed Matter · Physics 2024-09-24 Yeonsu Jung , Thomas Plumb-Reyes , Hao-Yu Greg Lin , L. Mahadevan

When an inextensible elastic rod is 'injected' through a sliding sleeve against a fixed constraint, configurational forces are developed, deeply influencing the mechanical response. This effect, which is a consequence of the change in…

Soft Condensed Matter · Physics 2015-09-22 F. Bosi , D. Misseroni , F. Dal Corso , D. Bigoni

Buckling plays a critical role in the transport and dynamics of elastic microfilaments in Stokesian fluids. However, previous work has only considered filaments with homogeneous structural properties. Filament backbone stiffness can be…

Soft Condensed Matter · Physics 2023-01-20 Thomas Nguyen , Harishankar Manikantan

When a soft elastic cylinder is bent beyond a critical radius of curvature, a sharp fold in the form of a kink appears at its inner side while the outer side remains smooth. The critical radius increases linearly with the diameter of the…

Soft Condensed Matter · Physics 2007-05-23 Apurba Lal Das , Animangsu Ghatak

The evolution of various competing cell types in tissues, and the resulting persistent tissue population, is studied numerically and analytically in a particle-based model of active tissues. Mutations change the properties of cells in…

Populations and Evolution · Quantitative Biology 2024-06-03 Tobias Büscher , Nirmalendu Ganai , Gerhard Gompper , Jens Elgeti

Spontaneous growth of long-wavelength deformations is a defining feature of active fluids with orientational order. We investigate the effect of biaxial rectangular confinement on the instability of initially shear-aligned 3D isotropic…

Soft Condensed Matter · Physics 2021-01-04 Pooja Chandrakar , Minu Varghese , S. Ali Aghvami , Aparna Baskaran , Zvonimir Dogic , Guillaume Duclos

We study theoretically the shapes of biological tubes affected by various pathologies. When epithelial cells grow at an uncontrolled rate, the negative tension produced by their division provokes a buckling instability. Several shapes are…

Biological Physics · Physics 2012-07-09 Edouard Hannezo , Jean-Francois Joanny , Jacques Prost

More physics at the boundaries of a topological lattice remains to be explored for future applications of topological edge states. This work investigates the stability of topological edge states in the presence of a moving impurity. By…

Mesoscale and Nanoscale Physics · Physics 2026-01-23 Baikang Yuan , Jiangbin Gong

We analyse the effects that the impermeability constraint induces on the equilibrium shapes of a three-dimensional vesicle hosting a rigid inclusion. A given alteration of the inclusion and/or vesicle parameters leads to shape modifications…

Soft Condensed Matter · Physics 2009-11-10 Paolo Biscari , Silvia Maria Canevese , Gaetano Napoli

Understanding the influence of measurements on the properties of many-body systems is a fundamental problem in quantum mechanics and for quantum technologies. This paper explores how a finite density of stochastic local measurement modifies…

Quantum Physics · Physics 2024-12-25 Alessio Paviglianiti , Xhek Turkeshi , Marco Schirò , Alessandro Silva

During the life of animals, epithelial tissues undergo extensive deformations--first to form organs during embryogensis and later to preserve integrity and function in adulthood. To what extent these deformations resemble that of non-living…

Soft Condensed Matter · Physics 2025-04-23 Urska Andrensek , Matej Krajnc

The apparently intractable shape of a fold in a compressed elastic film lying on a fluid substrate is found to have an exact solution. Such systems buckle at a nonzero wavevector set by the bending stiffness of the film and the weight of…

Soft Condensed Matter · Physics 2011-10-12 Haim Diamant , Thomas A. Witten

We use a three-dimensional formulation of the cell vertex model to describe the mechanical properties of a confluent planar monolayer of prismatic cells. Treating cell height as a degree of freedom, we reduce the model to a two-dimensional…

Biological Physics · Physics 2025-08-29 Natasha Cowley , Sarah Woolner , Oliver E. Jensen

Investigation of inhomogeneities has wide applications in different areas of mechanics including the study of composite materials. Here, we analytically study an arbitrarily-shaped isotropic inhomogeneity embedded in a finite-sized…

Soft Condensed Matter · Physics 2018-11-20 Ehsan Ban

Mathematical models of biological growth commonly attempt to distinguish deformation due to growth from that due to mechanical stresses through a hypothesised multiplicative decomposition of the deformation gradient. Here we demonstrate…

Mathematical Physics · Physics 2012-10-29 Isaac Vikram Chenchiah , Patrick D. Shipman

Morphoelastic rods are thin bodies which can grow and can change their intrinsic curvature and torsion. We deduce a system of equations ruling accretion and remodeling in a morphoelastic rod by combining balance laws involving non-standard…

Classical Physics · Physics 2014-10-24 Alessandro Tiero , Giuseppe Tomassetti

We describe explicitly how entanglement between quantum mechanical subsystems can lead to emergent gauge symmetry in a classical limit. We first provide a precise characterisation of when it is consistent to treat a quantum subsystem…

High Energy Physics - Theory · Physics 2022-09-12 Josh Kirklin